Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq37 113 1e-19 seq70 89.7 1e-12 >seq37 Length=175141 Score = 113 bits (124), Expect = 1e-19 Identities = 194/277 (70%), Gaps = 6/277 (2%) Strand=Plus/Minus Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885 ||||| |||||| ||||| ||| || ||| | ||||| || ||||| | | || Sbjct 162679 CTTTGGTTTCAAGACGCTTGAGCGCTCATATTTGCTCAAGATCAATGGCCGTACAGCAGA 162620 Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGAT--GACATAGAG 248943 || || |||||| | ||||| || |||||||| |||||| || | ||| | ||| Sbjct 162619 GCGGCCACAACACATGATCATGCGTGTCGCTGTCGGCATTCAC--GGCTCGGACCTCGAG 162562 Query 248944 AGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACG 249003 | ||||| |||||||||| | ||| || || | | || || ||| | || || Sbjct 162561 CGTGTGCTTGAGACGTACAACCTCATGTCCGAGCGATTCTTCACGCACGCCTCGCCAACT 162502 Query 249004 CTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCA 249062 |||||||| ||||| || | ||| | |||||| ||||| ||||| || || |||| | Sbjct 162501 CTCTTCAATGCCGGCACACCTCACCC-TCAGCTCAGCTCATGCTTCCTGGTTTGCATGAA 162443 Query 249063 AGACGACTCTGTCGACGGCATTTATGACACGCTTAAA 249099 |||||||||| | || || || || || || || ||| Sbjct 162442 AGACGACTCTATTGAAGGTATCTACGATACTCTCAAA 162406 >seq70 Length=136885 Score = 89.7 bits (98), Expect = 1e-12 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 157258 GTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCAT 157317 ||| |||| || | ||||| || || |||||||| ||||| || ||||||| |||||| Sbjct 72863 GTAATCGGAGACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGTGAAATCAGGTCCAT 72922 Query 157318 CCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTA 157377 | ||||||||||| | | |||||| ||| |||| ||| ||| | ||| | Sbjct 72923 GAAGTCGAATGGGTTCGTGGCGTTGTAGTGCTTTTCGTTCCCGAGCGAGACCAGGAGGCG 72982 Query 157378 GTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCGAC 157437 |||||| || |||| |||||||| ||| | || | || |||||||| || || Sbjct 72983 GTCCGCGACGAACTCGATGTACTGGCACATCAGCGGGGCGTTCATGCCGATGAGTGCAAC 73042 Query 157438 GGGAAGCGC 157446 ||| || || Sbjct 73043 GGGCAGTGC 73051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073756604566016