Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq70 196 4e-45 seq37 125 6e-24 seq1 114 1e-20 seq52 104 2e-17 >seq70 Length=136885 Score = 196 bits (216), Expect = 4e-45 Identities = 387/567 (68%), Gaps = 17/567 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || ||||| ||||||| || || | ||||| Sbjct 75277 ATCTGGCAGATGTACAAGAAGGCTGAGGCGTCGTTCTGGACCGCAGAGGAGATGGACCTA 75336 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| ||| || ||| | || | || || ||| | | || || Sbjct 75337 TCCAAGGACCTGCATGACTGGCACAACCGTCTGAACGACGACGAGCGCCACTTCATCTCG 75396 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || |||||||| || ||||| || ||||| || |||||| | ||||| | Sbjct 75397 CACGTCCTCGCCTTTTTCGCTGCGTCCGACGGCATTGTCAATGAGAATCTCGTCGAGCGG 75456 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | ||||| || || | ||||| | ||||| ||||| || || | || Sbjct 75457 TTCTCCAACGAAGTACAGGTTGCTGAGGCACGGTGCTTCTACGGCTTCCAGATCATGATG 75516 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | ||| ||||| |||||||| || || | |||||| | || Sbjct 75517 GAGAACATCCACTCCGAGACGTACTCGCTCCTCATCGACACCTATATCAAGGACCCC-AC 75575 Query 57867 GAGAAACGT-AGA--CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | | ||| || ||||| |||||||||| || || ||| ||| |||||||| Sbjct 75576 GC--AGCGTGAGCACCTGTTTGACGCGATCGACACCATCCCCTGCATCAAGAAGAAGGCG 75633 Query 57924 GAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAAT 57979 || ||| | || ||||| | ||| | || ||||||||||| | || || Sbjct 75634 GACTGGGCCCTCCGTTGGATCTCGGACAAG----AAATCCTCGTTCGCCGAGCGTCTTAT 75689 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 || ||||| || ||||| ||||| ||||| || ||| || ||| | || || ||| | Sbjct 75690 TGCCTTCGCAGCGGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCGTCGATCTTCTGGCT 75749 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||| ||||| || ||||||||||||||||| |||||| | || || || || Sbjct 75750 CAAGAAGCGCGGTCTCATGCCCGGCCTGACGTTCTCGAACGAGCTCATCAGCCGTGATGA 75809 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCT 58126 |||| | || || || || |||||||| Sbjct 75810 GGGTATGCACACCGACTTCGCGTGCCT 75836 Score = 167 bits (184), Expect = 2e-36 Identities = 370/552 (67%), Gaps = 11/552 (2%) Strand=Plus/Minus Query 57582 TACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTG 57641 ||||| || || |||||||| || ||||| | || || | ||||| | | || || Sbjct 73749 TACAAGAAAGCCGAAGCATCATTCTGGACAGCTGAGGAGATCGACCTCAGTCACGACCTC 73690 Query 57642 AGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCG 57698 | || ||||| || | || || ||| || ||||||| ||||| | || Sbjct 73689 TGGGACTGGGAGAACCGGCTGAACGACAACGAGCGATATTTTATCTCGCACGTCCTCGCC 73630 Query 57699 TTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAA 57758 ||||||||||| || || || || || |||||||| | |||| | || || | || Sbjct 73629 TTTTTCGCCGCCTCGGACGGGATCGTCAACGAGAACCTCCTCGAGCGGTTCTCCAACGAG 73570 Query 57759 GTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCAT 57818 ||||| || | |||||| | || || ||||| || || | || || ||| | || Sbjct 73569 GTGCAGGTCGCCGAGGCGCGGTGTTTCTACGGCTTCCAGATCATGATGGAGAACATCCAC 73510 Query 57819 TCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA----CAACGACGAGAAACG 57874 || || | ||||||||| |||||||| || ||| | ||||| || || || | Sbjct 73509 TCCGAGACGTATTCGCTCCTCATCGACACCTACATCAAGGAGCCGCATGTGCGCGA---G 73453 Query 57875 TAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAAT 57934 | |||||| |||||||||| || |||| ||| |||||||| || ||| | | Sbjct 73452 CAC-CTGTTCGACGCGATCGAGACCGTGCCGTGCATCAAGAAGAAGGCGGACTGGGCGCT 73394 Query 57935 CAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGT 57994 ||||| | | | | ||||| | ||| |||| | ||||||||||| || Sbjct 73393 GCGCTGGATCGCGGACAAAAAGTCGACGTTTACGGAGCGGCTTGTTGCGTTCGCCGCGGT 73334 Query 57995 CGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCT 58054 |||||| || ||||| || ||| || ||| | || || ||| | ||||| || || || Sbjct 73333 CGAAGGCATTTTCTTCTCCGGCTCGTTCGCGTCGATCTTCTGGCTCAAGAAGCGTGGTCT 73274 Query 58055 GATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGA 58114 ||||||||||||||||| |||||| | || ||||| |||||| | || || || Sbjct 73273 TATGCCCGGCCTGACGTTCTCGAACGAGCTCATCAGCCGCGATGAGGGTATGCACACCGA 73214 Query 58115 TTTTGCGTGCCT 58126 ||||| || || Sbjct 73213 CTTTGCATGTCT 73202 >seq37 Length=175141 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || || ||||| ||||| | ||| ||||| || || || || || |||||||| || || Sbjct 162050 AAGAGGTCCGGAATCCACAAAGCATAGAAGAGATCACGAGCACGGACCTCCTCCTTACCA 162109 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 ||||||| ||| || | || || || || || ||||||||||| |||| ||| | | Sbjct 162110 TGGTTCTTTCTCAGGTCGATGAACTCGAAGACATCGGCATGCCACGGTTCGATGTAGATG 162169 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 ||||| || || || | ||| ||||| |||||||||||||| || || || || |||| Sbjct 162170 GCAAAAGCTCCAGGGCGCTTGTTGCCACCCTGATCGACGTATCGAGCAGTTGCGTCGTAC 162229 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGA 23565 | | ||||| || || | ||||| || Sbjct 162230 GCACGGAGCATAGGGACAATGCCGTTCGA 162258 >seq1 Length=721539 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||||||||| |||| ||||| |||||||| | || || || | || Sbjct 157643 CATGCAGATCTTCGTAAAGACGTTGACGGGCAAGACGATCACGTTGGAGGTCGAGTCCTC 157584 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || || ||| ||||| || | || || || || Sbjct 157583 TGACACGATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCA 157524 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || ||||||||||| ||| |||| ||| ||| | ||||| || Sbjct 157523 GCAACGTCTTATCTTCGCTGGCAAGCAGCTGGAGGACGGGCGCACTCTTTCTGATTACAA 157464 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || ||||||||||||||||| || || Sbjct 157463 CATTCAGAAGGAATCGACTCTTCATCTCGTCCT 157431 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || ||||| |||| || ||| | || Sbjct 158387 CATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACCATCACGCTCGAGGTCGAATCCTC 158328 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || || ||||||||| ||| | || |||||||| Sbjct 158327 TGACACGATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCA 158268 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| |||| ||| | || || ||| || || Sbjct 158267 GCAGCGTCTTATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACCTTGTCCGACTACAA 158208 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || || || || || ||| | || | ||||| Sbjct 158207 TATCCAGAAGGAGTCTACCCTGCACCTCGTCCTTCGTCTCCGTGGCGG 158160 Score = 100 bits (110), Expect = 3e-16 Identities = 150/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| ||||| || ||||| |||| || || | || Sbjct 158159 CATGCAGATCTTCGTTAAGACATTGACCGGCAAGACCATCACACTCGAGGTCGAGTCATC 158100 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || || ||| ||||| || | || || || || Sbjct 158099 TGACACAATCGATAATGTCAAGGCGAAGATTCAGGATAAGGAGGGTATCCCCCCTGATCA 158040 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||||||||| ||| |||| || | || || ||||| || Sbjct 158039 GCAGCGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGCACACTGTCAGATTACAA 157980 Query 31372 CATTCAAAAAGAATCGACTCTTCATC-TGGTA 31402 |||||| || || || ||||| || | ||||| Sbjct 157979 CATTCAGAAGGAGTCTACTCTGCACCTTGGTA 157948 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || || || ||||||||| | || || || | || Sbjct 157415 CATGCAGATCTTCGTCAAGACGCTCACTGGAAAGACGATCACCCTGGAGGTAGAGTCTTC 157356 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || || || || ||| ||||| ||| | || ||||| || Sbjct 157355 CGACACGATTGACAACGTGAAGGCGAAGATTCAGGATAAGGAGGGCATTCCCCCCGATCA 157296 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||| || || ||||||||||| ||| | || ||| | ||| || ||||| || Sbjct 157295 ACAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCAGGACGCTGTCGGATTACAA 157236 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| || || || || || ||||| || || ||| Sbjct 157235 CATCCAGAAGGAGTCTACACTTCACCTTGTTCTT 157202 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || || ||||| |||| || || | || Sbjct 157870 ATGCAGATCTTCGTGAAGACTCTCACGGGGAAGACAATCACGCTCGAAGTCGAGTCCTCT 157811 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| || | || ||||| ||| Sbjct 157810 GACACGATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGATCAG 157751 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||||||||| ||| | || ||| | || || ||||||||| Sbjct 157750 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGTTGTCCGATTATAAT 157691 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || || || || || ||| | || | ||||| Sbjct 157690 ATCCAGAAGGAGTCTACCCTGCACCTCGTCCTTCGTCTCCGTGGCGG 157644 >seq52 Length=153599 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||||||| || ||||| ||| |||| || ||| | || Sbjct 49216 ATGCAGATCTTTGTCAAGACCCTGACAGGGAAGACGATTACCCTCGAGGTGGAATCCTCG 49275 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | || ||||||||| ||| | |||||||||||| Sbjct 49276 GACACTATAGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 49335 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || ||||| ||||| ||| | || || Sbjct 49336 CAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAGGA 49370 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| |||| ||||| || |||||| |||| || || | || Sbjct 49497 ATGCAGATTTTCGTCAAGACGTTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCCTCG 49556 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | ||| ||||||||| ||| | |||||||||||| Sbjct 49557 GACACCATTGACAATGTCAAGGCCAAAATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 49616 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||| || || || || ||||| ||| | |||||| Sbjct 49617 CAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAAGAC 49652 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| |||| ||||| |||||||| | || ||||| |||| Sbjct 50060 CATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACGATCACTCTGGAGGTTGAGTCGTC 50119 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | || | ||||| | || ||| ||||| ||| | ||||||||||| Sbjct 50120 CGATACCATTGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCGCCCGACCA 50179 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| || || ||||| ||||| ||| | ||||| Sbjct 50180 GCAGCGCCTCATCTTCGCGGGCAAGCAGCTTGAAGA 50215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762432679040