Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq70 206 4e-48 >seq70 Length=136885 Score = 206 bits (228), Expect = 4e-48 Identities = 353/508 (69%), Gaps = 8/508 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| |||||| |||| || || ||||| | || ||| | || || Sbjct 75277 ATCTGGCAGATGTACAAGAAGGCTGAGGCGTCGTTCTGGACCGCAGAGGAGATGGACCTA 75336 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||||||| | || ||| | | ||| ||| || ||||| | || || ||| Sbjct 75337 TCCAAGGACCTGCATGACTGGCACAACCGTCTGAACGACGACGAGCGCCACTTCATCTCG 75396 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | ||||| || || | ||||| || || ||||| || ||||| || || || Sbjct 75397 CACGTCCTCGCCTTTTTCGCTGCGTCCGACGGCATTGTCAATGAGAATCTCGTCGAG-CG 75455 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||||| | || | || | |||| |||||| ||||| ||||| |||||||| Sbjct 75456 GTTCTCCAACGAAGTACAGGTTGCTGAGGCACGGTGCTTCTACGGCTTCCAGATCATGAT 75515 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC--- 125314 |||||| | ||||| || | |||||| || || |||| || || || || Sbjct 75516 GGAGAACATCCACTCCGAGACGTACTCGCTCCTCATCGACACCTATATCAAGGACCCCAC 75575 Query 125315 GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374 ||| ||| | ||| || ||| |||| |||||||| | || | || || ||||| Sbjct 75576 GCAGCGTGAGCACCTG---TTTGACGCGATCGACACCATCCCCTGCATCAAGAAGAAGGC 75632 Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 | |||| | || |||||| ||| | || || |||| |||||| | || | || Sbjct 75633 GGACTGGGCCCTCCGTTGGATCTCGGACAAGAAATCCTCGTTCGCCGAGCGTCTTATTGC 75692 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494 ||||| || || ||||| |||||||| || || || ||| | ||||| |||||||| Sbjct 75693 CTTCGCAGCGGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCGTCGATCTTCTGGCTCAA 75752 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACG 125522 ||||||||| ||||||||||| |||||| Sbjct 75753 GAAGCGCGGTCTCATGCCCGGCCTGACG 75780 Score = 192 bits (212), Expect = 9e-44 Identities = 380/559 (68%), Gaps = 10/559 (2%) Strand=Plus/Minus Query 125031 TACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCT--GTCCAAGGACC 125088 ||||| || || | || || || ||||| | || ||| |||| || ||| | |||| Sbjct 73749 TACAAGAAAGCCGAAGCATCATTCTGGACAGCTGAGGAGATCGACCTCAGTC--ACGACC 73692 Query 125089 TGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGG 125148 | | || ||||||| || ||| || | |||||| | ||||| |||||| | | | Sbjct 73691 TCTGGGACTGGGAGAACCGGCTGAACGACAACGAGCGATATTTTATCTCGCACGTCCTCG 73632 Query 125149 CCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAG 125208 |||| || |||| ||| || || ||||||||||| || || | || ||||| | | Sbjct 73631 CCTTTTTCGCCGCCTCGGACGGGATCGTCAACGAGAACCTCCTCGAGCGGTTCTCCAACG 73572 Query 125209 AGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGC 125268 || || | | |||| | ||| || ||||| ||||| |||||||| |||||| | | Sbjct 73571 AGGTGCAGGTCGCCGAGGCGCGGTGTTTCTACGGCTTCCAGATCATGATGGAGAACATCC 73512 Query 125269 ACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAA---CGTAAAC 125325 |||| || | ||| || || || |||| ||||| || ||||| || | | Sbjct 73511 ACTCCGAGACGTATTCGCTCCTCATCGACACCTACATCAAGGAGCCGCATGTGCGCGAGC 73452 Query 125326 ACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGA 125385 || || || |||| ||||| || ||||||| || || ||||| | |||| | Sbjct 73451 ACCTGTTCG---ACGCGATCGAGACCGTGCCGTGCATCAAGAAGAAGGCGGACTGGGCGC 73395 Query 125386 TTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCG 125445 | || ||||||| ||| | ||||| ||| | || | || || || |||||||| | Sbjct 73394 TGCGCTGGATCGCGGACAAAAAGTCGACGTTTACGGAGCGGCTTGTTGCGTTCGCCGCGG 73335 Query 125446 TAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGAC 125505 | || ||||| ||||| || || || ||| | ||||| |||||||||||||| || | Sbjct 73334 TCGAAGGCATTTTCTTCTCCGGCTCGTTCGCGTCGATCTTCTGGCTCAAGAAGCGTGGTC 73275 Query 125506 TCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTG 125565 | |||||||| |||||| | |||||| | || || || ||||| | ||| | Sbjct 73274 TTATGCCCGGCCTGACGTTCTCGAACGAGCTCATCAGCCGCGATGAGGGTATGCACACCG 73215 Query 125566 ACTTTGCCATTCTACTGTT 125584 ||||||| ||| ||||| Sbjct 73214 ACTTTGCATGTCTGCTGTT 73196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741052604573120