Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq57 98.7 2e-16 seq1 89.7 8e-14 >seq57 Length=145352 Score = 98.7 bits (108), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| ||||| |||||||| || ||||||||||| |||||||| |||| Sbjct 27337 AGGTATCACTAAGCCCGCTATTCGTCGTCTTGCCCGTCGTGGTGGTGTCAAGCGGATCTC 27278 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 || | |||| || |||| |||| || |||||||||||||| ||| ||| Sbjct 27277 CGGTCTCATCTACGAGGAGACCCGTGGCGTCCTGAAGATCTTCCTCGAGAACGT 27224 >seq1 Length=721539 Score = 89.7 bits (98), Expect = 8e-14 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 |||||||| ||||| || || |||||||| || |||||| ||||||| | |||| || Sbjct 41260 GCTATCCGCCGTCTCGCCCGCCGTGGTGGTGTTAAGCGTATCTCTGGCCTCATCTACGAG 41201 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| || | ||| |||||||||||||| ||| || |||| ||| | || || Sbjct 41200 GAGACACGCGGTGTCCTGAAGATCTTCCTCGAGAATGTCATCCGTGACTCCGTCACGTAC 41141 Query 16607 ACCGAGCACGCTAAACG 16623 || |||||||| || || Sbjct 41140 ACTGAGCACGCGAAGCG 41124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074549013416