Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq52 95.1 1e-14 >seq52 Length=153599 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||||| || | ||||| | || || ||||||||| Sbjct 49780 ATGCAGATTTTCGTTAAGACGCTGACCGGCAAGACGATCACTCTGGAGGTTGAGTCGTCT 49839 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || || ||||| || | Sbjct 49840 GACACCATCGA--CAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCGGATC 49897 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | || ||||| ||||| || || || |||| || ||| | ||| |||| Sbjct 49898 AGCAGCGCCTCATCTTTGCTGGCAAGCAGTTGGAGGATGGCCGTACTCTCTCCGACTACA 49957 Query 25177 ATATTCAAAAAGA 25189 | ||||| || || Sbjct 49958 ACATTCAGAAGGA 49970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433324239796280