Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq70 154 2e-32 >seq70 Length=136885 Score = 154 bits (170), Expect = 2e-32 Identities = 374/562 (67%), Gaps = 11/562 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 |||||| |||||||| || | ||| || || || || | ||| || ||| || | Sbjct 75834 GCACGCGAAGTCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTCAG 75775 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || || ||||||||||| || || || || || ||||| || || Sbjct 75774 GCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGAGCCAGAGAAGAA 75715 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268 ||||| || || ||||| || || | || ||| ||||| || | ||| || || Sbjct 75714 GATACCCTCGACCGCTGCGAAGGCAATAAGACGCTCGGCGAA---CGAGGATTTCTTGTC 75658 Query 93269 -CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 |||||| | ||||| || || || ||||| || || || | || ||||| || Sbjct 75657 CGAGATCCAACGGAGGGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATCGC 75598 Query 93328 GTTAAATAGGTAATCTCGCT-CGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 || ||| |||| || |||| ||| | || | || || || ||||| | || || | Sbjct 75597 GTCAAACAGGTGCTCACGCTGCGTGGGGTCCTTG-ATATAGGTGTCGATGAGGAGCGAGT 75539 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 || | || || |||| |||||||| || ||||| |||||||| || | || || | Sbjct 75538 ACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACCGTGCCTCAG 75479 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 | ||| ||||| | || || | ||| |||||||| |||||||| || || ||||| | Sbjct 75478 CAACCTGTACTTCGTTGGAGAACCGCTCGACGAGATTCTCATTGACAATGCCGTCGGACG 75419 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTAT 93563 | || ||||| || | | ||| || || || ||| || || || | | || | Sbjct 75418 CAGCGAAAAAGGCGAGGACGTGCGAGATGAAGTGGCGCTCGTCGTCGTTCAGACGGTTGT 75359 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| || || || || || || || | || || | ||||| ||||| || || | Sbjct 75358 GCCAGTCATGCAGGTCCTTGGATAGGTCCATCTCCTCTGCGGTCCAGAACGACGCCTCAG 75299 Query 93624 CTTTTTTGTACATATCCCATAT 93645 | || |||||||| | ||| || Sbjct 75298 CCTTCTTGTACATCTGCCAGAT 75277 Score = 141 bits (156), Expect = 1e-28 Identities = 361/546 (66%), Gaps = 5/546 (1%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||||||||| || | ||| || || || || | ||| || ||| || | Sbjct 73205 CATGCAAAGTCGGTGTGCATACCCTCATCGCGGCTGATGAGCTCGTTCGAGAACGTCAGG 73264 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || || || ||||||||||| || || || || || || || || || Sbjct 73265 CCGGGCATAAGACCACGCTTCTTGAGCCAGAAGATCGACGCGAACGAGCCGGAGAAGAAA 73324 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGCT 93270 || ||||| || || || || || |||| || || | ||| | | || | || Sbjct 73325 ATGCCTTCGACCGCGGCGAACGCAACAAGCCGCTCCGTAAACGTCGACTTTTTGTCCGC- 73383 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 |||||| | ||||| || || || ||||| || || || | || ||||| |||| Sbjct 73384 GATCCAGCGCAGCGCCCAGTCCGCCTTCTTCTTGATGCACGGCACGGTCTCGATCGCGTC 73443 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 || |||| || ||| | | || || ||||| || ||||| | || |||||| | Sbjct 73444 GAACAGGTGCTCGCGCACATGCGGCTCCTTGATGTAGGTGTCGATGAGGAGCGAATACGT 73503 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 || || |||| |||||||| || ||||| ||||||||||| | || || | || Sbjct 73504 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAACACCGCGCCTCGGCGAC 73563 Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 |||||| || | || || | ||| | ||| || || ||||| || || || || || || Sbjct 73564 CTGCACCTCGTTGGAGAACCGCTCGAGGAGGTTCTCGTTGACGATCCCGTCCGAGGCGGC 73623 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCA 93567 ||||| || | | ||| ||||||| | ||| | || || ||| || ||||| Sbjct 73624 GAAAAAGGCGAGGACGTGCGAGATAAAATATCGCTCGTTGTCGTTCAGCCGGTTCTCCCA 73683 Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627 || | || || | || |||| || || | ||||| || |||||||| ||||| Sbjct 73684 GTCCCAGAGGTCGTGACTGAGGTCGATCTCCTCAGCTGTCCAGAATGATGCTTCGGCTTT 73743 Query 93628 TTTGTA 93633 ||||| Sbjct 73744 CTTGTA 73749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556855843938880