Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq70 302 8e-77 seq37 150 3e-31 >seq70 Length=136885 Score = 302 bits (334), Expect = 8e-77 Identities = 466/656 (71%), Gaps = 12/656 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || ||||||||| |||||||| ||||| Sbjct 75277 ATCTGGCAGATGTACAAGAAGGCTGAGGCGTCGTTCTGGACCGCAGAGGAGATGGACCTA 75336 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAGTTT---TTCCTCAA 42415 |||||||| | | |||| | || |||||| |||| || ||| || Sbjct 75337 TCCAAGGACCTGCATGACTGGCACA-ACCGTCTGAACGACGACGAGCGCCACTTCATCTC 75395 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | || ||||| ||||| || || |||||||| ||||||||||| || | | | Sbjct 75396 GCACGTCCTCGCCTTTTTCGCTGCGTCCGACGGCATTGTCAATGAGAATCTCGTCGAGCG 75455 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| || || || ||| |||||| || |||||||||||||||||||| || Sbjct 75456 GTTCTCCAACGAAGTACAGGTTGCTGAGGCACGGTGCTTCTACGGCTTCCAGATCATGAT 75515 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| |||| | || || |||| || ||| ||| ||| Sbjct 75516 GGAGAACATCCACTCCGAGACGTACTCGCTCCTCATCGACACCTATATCAAGGACCCCAC 75575 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 ||||| | ||||| | || || || || || ||||||||||||||||||||||| Sbjct 75576 GCAGCGTGAGCACCTGTTTGACGCGATCGACACCATCCCCTGCATCAAGAAGAAGGCGGA 75635 Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAGCCT 42714 |||||| ||| |||||| | | | | | | |||||| |||| | || | |||| Sbjct 75636 CTGGGCCCTCCGTTGGATCTCG-GACAAGAAATCCTCGTTCGCCGAGCGTCTTATTGCCT 75694 Query 42715 TTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGC 42774 | | || |||||||| ||||||||||| ||| | ||||| || ||||||||||||||| Sbjct 75695 TCGCAGCGGTCGAGGGTATCTTCTTCTCTGGCTCGTTCGCGTCGATCTTCTGGCTCAAGA 75754 Query 42775 AG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGG 42833 || ||| || |||||||| || || ||||||||||| ||||||||| | || ||||| Sbjct 75755 AGCGCGGTCTC-ATGCCCGGCCTGACGTTCTCGAACGAGCTCATCAGCCGTGATGAGGGT 75813 Query 42834 CTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAG 42893 |||| | ||||| || ||||| || ||| | |||||||| || ||| Sbjct 75814 ATGCACACCGACTTCGCGTGCCTGCTCTTC---AACCACCTCAAGCGGCGGCCTCACCCC 75870 Query 42894 GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 ||| ||| | ||||||| ||||||||| ||||||||| ||||||||||||| Sbjct 75871 GAGGTCGTCAAGAGGATCATCATGGAGGCCGTCGAGATCGAGCAGGAGTTCCTCAC 75926 Score = 260 bits (288), Expect = 3e-64 Identities = 329/445 (74%), Gaps = 8/445 (2%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG--GTTCA 42480 || ||||| ||||||||||| ||||| || ||||| |||||||| || | || |||| Sbjct 73635 CTCGCCTTTTTCGCCGCCTCGGACGGGATCGTCAACGAGAACCT--CCTCGAGCGGTTCT 73578 Query 42481 TGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 || ||||||||| | |||||||| || ||||||||||||||||| || |||| Sbjct 73577 CCAACGAGGTGCAGGTCGCCGAGGCGCGGTGTTTCTACGGCTTCCAGATCATGATGGAGA 73518 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600 || | ||||| ||| ||| | || || |||| |||||| ||| || | || Sbjct 73517 ACATCCACTCCGAGACGTATTCGCTCCTCATCGACACCTACATCAAGGAGCCGCATGTGC 73458 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | | |||||| | || || ||||| |||| ||||||||||||||||||||||||| Sbjct 73457 GCGAGCACCTGTTCGACGCGATCGAGACCGTGCCGTGCATCAAGAAGAAGGCGGACTGGG 73398 Query 42661 CGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTTACC 42719 |||| |||||||| | | | | | | ||||| ||| |||| || || || || Sbjct 73397 CGCTGCGCTGGATCGCG-GACAAAAAGTCGACGTTTACGGAGCGGCTTGTTGCGTTCGCC 73339 Query 42720 GCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAG 42779 || ||||| ||||| |||||||| ||| | ||||| || ||||||||||||||| || Sbjct 73338 GCGGTCGAAGGCATTTTCTTCTCCGGCTCGTTCGCGTCGATCTTCTGGCTCAAGAAGCGT 73279 Query 42780 GTGTCG-ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838 | ||| |||||||| || || ||||||||||| ||||||||| | || ||||| |||| Sbjct 73278 G-GTCTTATGCCCGGCCTGACGTTCTCGAACGAGCTCATCAGCCGCGATGAGGGTATGCA 73220 Query 42839 TAGGGACTTTGCCTGCCTCCTGTTC 42863 | |||||||| || || |||||| Sbjct 73219 CACCGACTTTGCATGTCTGCTGTTC 73195 >seq37 Length=175141 Score = 150 bits (166), Expect = 3e-31 Identities = 339/503 (67%), Gaps = 26/503 (5%) Strand=Plus/Plus Query 244293 TGAGGCCCCACATGTCAAACTGCAGCA-GCCCCTTGCTGACGGGGCTGCCCTCGTAGGTC 244351 ||| |||||| | |||| |||||||| |||||| | | | |||||||||||||| ||| Sbjct 161243 TGATGCCCCAGAGGTCATACTGCAGCTCGCCCCTGGAAG-CAGGGCTGCCCTCGTACGTC 161301 Query 244352 GGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATG 244411 ||| ||||| || || |||| | | |||| | |||| || || | |||||| Sbjct 161302 TCGTAAGGACCATCCTTCTCCGCCATGTCGCTGCTCGCCTCGACAGCAGCATGGTAGATC 161361 Query 244412 GTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCAGGTGAAGGGGATGCCCAT 244470 || ||||||||| |||||| | ||||| |||| | || | |||||| |||| || Sbjct 161362 GTTTCGAAGATCTGCTTGTTGAGCTCGCGTGCCTCAGGCG-ACTCGAAGGGCATGCGCAG 161420 Query 244471 CATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTT 244530 ||||||| |||||| || |||||||| |||| ||||| || | || ||| |||| Sbjct 161421 AGCCATGAAGGTGTCGGCAAGACCCTGCACACCGACACCGATCGGCCGATGACGCATGTT 161480 Query 244531 GGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCG 244590 ||||| ||| ||||| | ||| || ||||| |||| || | |||||||||| Sbjct 161481 CGAGCGGCGGGCCTCGGGGATGGGATAGTAGTTGACGTCAATGATGCGGTTGAGGTTGAA 161540 Query 244591 GGTGA--TCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCG 244648 || | | | || ||||||| || |||| |||| ||||| | | | || Sbjct 161541 GGCAACGACCTTCG--TGACGTCGTGGAGACGCTGGAAGTTGTACTTGCCG---TTCT-- 161593 Query 244649 GCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACC 244708 ||||| || | |||||| | || || ||||| ||||| | Sbjct 161594 -CGATG------------AAAGAGGGGAGGGCAATCGACGCGAGATTGCATACGGCGGTC 161640 Query 244709 TCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCC 244768 || |||| | ||||| | ||||| ||||||||||| ||||||| || ||| Sbjct 161641 TCATCCGGCGCCGAGTACTCAATGATCTCCGTGCAGAGGTTGGACGACTTGATAGTACCC 161700 Query 244769 AGGTGCTGGTGATTGGACTTGGC 244791 |||| ||| || ||||||||||| Sbjct 161701 AGGTTCTGCTGGTTGGACTTGGC 161723 Score = 89.7 bits (98), Expect = 1e-12 Identities = 157/228 (69%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 245015 AAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCA 245074 |||||||| || ||||| | || | |||||| || | | | ||| ||| ||| Sbjct 162050 AAGAGGTCCGGAATCCACAAAGCATAGAAGAGATCACGAGCACGGACCTCCTCCTTACCA 162109 Query 245075 GTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACA 245134 |||||| ||||| || | || || ||||| ||| | ||||| || || ||||||| Sbjct 162110 TGGTTCTTTCTCAGGTCGATGAACTCGAAGACATCGGCATGCCACGGTTCGATGTAGATG 162169 Query 245135 GCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTT 245190 || | || || || ||||||||||| ||||| || | | | |||||| |||| Sbjct 162170 GCAAAAGCTCCAGGGCGCTTGTTGCCACCCTGATCGA----CGTATCGAGCAGTTGCGTC 162225 Query 245191 GAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238 | | || || |||| || |||||||| |||| |||||| ||||| Sbjct 162226 GTACGCACGGAGCATAGGGACAATGCCGTTCGAGTAGCCGTTCGTGCC 162273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944330795381120