Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq70 122 2e-22 >seq70 Length=136885 Score = 122 bits (134), Expect = 2e-22 Identities = 126/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || |||||||| | | |||||| | ||||||||||| ||||| || || ||| | Sbjct 75999 CTCATCGGCATGAATGCGAAGCTCATGTGCCAGTACATCGAGTTCGTCGCAGATCGCCTG 76058 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||||||||| | ||| ||||||||| | | ||||||||| | ||| ||||| Sbjct 76059 CTTGTCGCGCTTGGCGACCCGAAGGTGTACAACGCGACGAACCCCTTCGACTTCATGGAC 76118 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTC 243726 ||||| ||||| || || || || ||||||||||| ||||| ||| Sbjct 76119 CTCATCTCGCTCCAGGGTAAGACAAACTTCTTCGAGAAGCGAGTC 76163 Score = 96.9 bits (106), Expect = 8e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || ||||||||| | || ||| | ||||||||||| ||||| || |||||| | Sbjct 73036 CTCATCGGCATGAACGCCCCGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTC 72977 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | || |||| || | || || |||||| ||| |||||| || | ||| ||||| Sbjct 72976 CTGGTCTCGCTCGGGAACGAAAAGCACTACAACGCCACGAACCCATTCGACTTCATGGAC 72917 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTA 243734 || ||||| || || || || || || |||||||| ||||| ||| ||||| Sbjct 72916 CTGATTTCACTGCAGGGCAAGACCAATTTCTTCGAGAAGCGCGTCTCCGATTA 72864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102869938977200