Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq37 102 8e-17 >seq37 Length=175141 Score = 102 bits (112), Expect = 8e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 95295 CGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGT 95354 |||||| || ||||| |||||| || || || |||||||||||| ||||||||||||| Sbjct 160922 CGGCTCAGTGCAGAAGATCCCGAGCATCCCCGACGACATCAAGGCGATCTACAAGACCGT 160863 Query 95355 GTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTG 95414 ||||||||| ||||| ||| || |||| ||| || | ||| || | ||| |||| Sbjct 160862 CTGGGAGATCTCGCAGAAGAAGATCCTTGACCTCGCTGCGGACCGTGGTGCATTCGTCTG 160803 Query 95415 CCAGAG 95420 |||||| Sbjct 160802 CCAGAG 160797 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 || ||||| ||| || || ||| ||| |||||| | |||||||||||||| | | | Sbjct 162285 TCTTACATTGCCGGCACGAACGGCTACTCGAACGGCATTGTCCCTATGCTCCGTGCGTAC 162226 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 || | || || ||||| || |||||||| | | | || |||| || || Sbjct 162225 GACGCAACTGCTCGATACGTCGATCAGGGTGGCAACAAGCGCCCTGGAGCTTTTGCCATC 162166 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 || |||| || ||||| || || || | |||||||||||| |||||||||| || Sbjct 162165 TACATCGAACCGTGGCATGCCGATGTCTTCGAGTTCATCGACCTGAGAAAGAACCATGGT 162106 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 || || || | || | || |||||||| ||| | ||| | || ||||| || Sbjct 162105 AAGGAGGAGGTCCGTGCTCGTGATCTCTTCTATGCTTTGTGGATTCCGGACCTCTT 162050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718796963520