Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 116 4e-21 >seq3 Length=462596 Score = 116 bits (128), Expect = 4e-21 Identities = 270/399 (68%), Gaps = 15/399 (4%) Strand=Plus/Plus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 ||||||||||||||| || |||||||||| || | ||||| ||||| || Sbjct 446341 GAAACCGTCCATTTCGACTAGGAGCTGGTTGAGAGTGTTCTCACGTTCATCATTTCCTCC 446400 Query 11652 CATACCACC-----TGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACG 11706 ||||| || |||| ||| ||| |||| ||| || || || |||||||| || Sbjct 446401 TATACCGCCGCGCTTGCC--ACGAGCCTTCCCGATAGCATCGATTTCGTCGATGAAGACA 446458 Query 11707 ATACACGGTTGGTTGGCACGTGCCTG-TTCGAAAAGTTCACGTACACGCTTCGCTCCAAC 11765 || |||| ||| | || | | |||| || || || ||||| | || || Sbjct 446459 ATGGACGGCGCGTT-CTTCTTGGCAGACGCGAAGAGGTCGCGGACACGGGAGGAACCGAC 446517 Query 11766 ACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACT 11824 ||| ||||||||||| ||||| || | || | | || || | |||||| ||||| | || Sbjct 446518 ACCGACGAACATCTCCACGAA-TTCGGAGCCGGAGACCGAGAAGAAGGGTACATTGGCCT 446576 Query 11825 CACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGG 11884 | || || | ||| ||||| | ||||||||| ||||| || | ||| | || | || Sbjct 446577 CGCCGGCAGTCGCTTTCGCGAGTAAAGTCTTACCGGTACCTGGAGGACCTGAAAGGATGG 446636 Query 11885 CGCCACGGGGGATCTTGGCACC--ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTC 11942 | |||||||| ||||| || || |||| ||| || |||| | ||||||||| Sbjct 446637 CACCACGGGGAATCTTCGCGCCTAGCTTC--TCGTACCGGGCAGGTTCCTTGAGGAATGA 446694 Query 11943 CACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACC 11981 || | |||| | ||||| |||||| ||| ||||| Sbjct 446695 GACGAACTCCATGATTTCCTGCTTGGCTTCGTCCATACC 446733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970758113600