Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq70 107 2e-18 seq109 93.3 5e-14 >seq70 Length=136885 Score = 107 bits (118), Expect = 2e-18 Identities = 188/267 (70%), Gaps = 10/267 (4%) Strand=Plus/Plus Query 64982 AGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAA 65041 |||| | ||||| || ||| | || | || || || ||||||||||| | ||||| Sbjct 75584 AGCACCTGTTTGACGCGATCGACACCATCCCCTGCATCAAGAAGAAGGCGGACTGGGCCC 75643 Query 65042 TGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGT 65098 | ||| | |||| || || ||| ||||||||||| ||| |||| || || Sbjct 75644 TCCGTTGGATCTCGGACAAGAAATC---CTCGTTCGCCGAGCGTCTTATTGCCTTCGCAG 75700 Query 65099 GTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGG 65157 || ||||||||||||||||| || || ||| ||| | || | ||| | |||||||| Sbjct 75701 CGGTCGAGGGTATCTTCTTCTCTGGCTCGTTC-GCGTCGATCTTCTGGCTCAAGAAGCGC 75759 Query 65158 GGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 ||||||||||| ||||| ||||| || || || || ||| ||||||||| | ||| Sbjct 75760 GGTCTCATGCCCGGCCTGACGTTCTCGAACGAGCTCATCAGCCGTGATGAGGGTATGCAC 75819 Query 65218 CAGGAGTTTGCCGTG-GAGCTCTTCAA 65243 || || | |||| ||||||||| Sbjct 75820 ACCGACTTCG-CGTGCCTGCTCTTCAA 75845 Score = 91.5 bits (100), Expect = 2e-13 Identities = 173/251 (69%), Gaps = 8/251 (3%) Strand=Plus/Minus Query 64982 AGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAA 65041 |||| | || || || ||| | || || || || || ||||||||||| | ||||| Sbjct 73454 AGCACCTGTTCGACGCGATCGAGACCGTGCCGTGCATCAAGAAGAAGGCGGACTGGGCGC 73395 Query 65042 TGAAATGGTTTG---ACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGT 65098 || ||| | | ||| |||||| | || | ||||| ||| ||||||| || Sbjct 73394 TGCGCTGGATCGCGGACAAAAAGTCGA---CGTTTACGGAGCGGCTTGTTGCGTTCGCCG 73338 Query 65099 GTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGG 65157 || || || || ||||||||||| || ||| ||| | || | ||| | |||||||| Sbjct 73337 CGGTCGAAGGCATTTTCTTCTCCGGCTCGTTC-GCGTCGATCTTCTGGCTCAAGAAGCGT 73279 Query 65158 GGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 ||||| ||||| ||||| ||||| || || || || ||| ||||||||| | ||| Sbjct 73278 GGTCTTATGCCCGGCCTGACGTTCTCGAACGAGCTCATCAGCCGCGATGAGGGTATGCAC 73219 Query 65218 CAGGAGTTTGC 65228 || ||||| Sbjct 73218 ACCGACTTTGC 73208 >seq109 Length=99073 Score = 93.3 bits (102), Expect = 5e-14 Identities = 207/311 (67%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 13548 TTACCGGTATTCCCAAGTTGGATGACGCGAACAAGGCGGGTACGGCACAATCTGGAAAGT 13607 |||| ||| |||| ||| | |||||| ||||| || || || || || | | Sbjct 38832 TTACGGGTCTTCCTAAGCTCTCTGACGCTAACAATGCCGGATCGAAGAAAGCTTCCGAAT 38891 Query 13608 GTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTG 13667 |||| ||||| |||| || || || || || || | || || || ||||||||| || Sbjct 38892 GTACGCTCATCCTCACTGAAGGAGACTCTGCGAAGTCTCTGGCTGTGGCGGGTCTCGGTG 38951 Query 13668 TCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGG 13727 |||| || || ||| ||| |||||| ||||| ||||| || || | ||||| || | Sbjct 38952 TCGTCGGCCGCGATAACTTCGGTGTCTTCCCCCTTCGTGGCAAGTTGCTCAATGTGCGAG 39011 Query 13728 ACGCTTCGGTGGCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCTTG 13787 |||| | | ||| | | ||| ||||| || | || ||||||||||||| | Sbjct 39012 ACGCAAAGCACGACCAGATTATGAAGAACGAGGAGATCCAGAATATCAAGAAGATCCTGG 39071 Query 13788 GTCTTCAACAAGGAAAAGACTACCAAGATGTTTCTGAACTTCGCTATGGTCGTCTTATGA 13847 || | || || || |||||| ||||| |||| || ||||| || |||| Sbjct 39072 GTTTGCAGCACAACAAGGACTACAGCGATGTCAACCAACTCCGATATGGCAAGCTCATGA 39131 Query 13848 TTATGACAGAT 13858 | ||| | ||| Sbjct 39132 TCATGGCTGAT 39142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596564290530560