Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq70 152 6e-31 seq126 116 5e-20 seq37 111 2e-18 seq100 105 8e-17 seq204 87.8 2e-11 seq49 87.8 2e-11 >seq70 Length=136885 Score = 152 bits (168), Expect = 6e-31 Identities = 150/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||| | | ||| ||| |||||| |||||| || ||||||||||||| || || ||| Sbjct 72855 GCCCTCGAGTAATCGGAGACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGTGAAATC 72914 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | ||| ||||| | | ||||||||||||||| |||||||| | Sbjct 72915 AGGTCCATGAAGTCGAATGGGTTCGTGGCGTTGTAGTGCTTTTCGTTCCCGAGCGAGACC 72974 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || |||||||| ||||| |||||||||||||||||||| || |||||||||||||||| Sbjct 72975 AGGAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCGGGGCGTTCATGCCGATG 73034 Query 868871 AGCGCCACCGGCAG 868884 || || || ||||| Sbjct 73035 AGTGCAACGGGCAG 73048 Score = 149 bits (164), Expect = 8e-30 Identities = 209/289 (72%), Gaps = 11/289 (4%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || || ||||| | ||||| || | |||||||||||||| |||||||| Sbjct 75813 ACCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTCAGGCCGGGCATGAGACCGCGCTT 75754 Query 869239 CTTGAGCCAAAAGAT-GGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297 ||||||||| ||||| | ||| ||| ||| ||||| ||||| |||||||| || || | Sbjct 75753 CTTGAGCCAGAAGATCGACGC-GAACGAGCCAGAGAAGAAGATACCCTCGACCGCTGCGA 75695 Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCG 869354 || | || || |||||||| || ||||| | ||||| |||||| | | Sbjct 75694 AGGCAATAAGACGCTCGGCGAA-----CGAGG-ATTTCTTGTCCGAGATCCAACGGAGGG 75641 Query 869355 CCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCT 869414 ||||||| ||||| ||| | | | || | |||||||| ||| ||| ||||| || Sbjct 75640 CCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATCGCGTCAAACAGGTGCTCAC 75581 Query 869415 TTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | | |||||||||| |||||||||||| |||||||| || ||||| Sbjct 75580 GCTGCGTGGGGTCCTTGATATAGGTGTCGATGAGGAGCGAGTACGTCTC 75532 Score = 145 bits (160), Expect = 9e-29 Identities = 184/251 (73%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| || |||| || || || Sbjct 75530 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACCGTGCCTCAGCAACCTGT 75471 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || || |||||| || | || ||||| || ||||||||| || |||||| Sbjct 75470 ACTTCGTTGGAGAACCGCTCGACGAGATTCTCATTGACAATGCCGTCGGACGCAGCGAAA 75411 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAG-CG--ACACCCAGTGG 869809 || || ||||||||| ||| |||||||||||||||||| | || || ||||| Sbjct 75410 AAGGCGAGGACGTGCGAGATGAAGTGGCGCTCGTCGTCGTTCAGACGGTTGTGCCAGTCA 75351 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 ||| | ||||||| |||||| |||||||||| ||| ||||| ||||| ||| Sbjct 75350 TGCAGGTCCTTGGATAGGTCCATCTCCTCTGCGGTCCAGAACGACGCCTCAGCCTTCTTG 75291 Query 869870 TACATCTCCCA 869880 ||||||| ||| Sbjct 75290 TACATCTGCCA 75280 Score = 143 bits (158), Expect = 3e-28 Identities = 208/289 (72%), Gaps = 11/289 (4%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || ||||| ||||| | ||||| || | ||||||||||| || || ||||| Sbjct 73225 ACCCTCATCGCGGCTGATGAGCTCGTTCGAGAACGTCAGGCCGGGCATAAGACCACGCTT 73284 Query 869239 CTTGAGCCAAAAGAT-GGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297 ||||||||| ||||| | ||| ||| ||| ||||| || ||||| ||||| ||||| | Sbjct 73285 CTTGAGCCAGAAGATCGACGC-GAACGAGCCGGAGAAGAAAATGCCTTCGACCGCGGCGA 73343 Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCG 869354 | | | |||||||| | ||| ||||| || |||| |||||| || || Sbjct 73344 ACGCAACAAGCCGCTCCGTAAA--CGTCGA----CTTTTTGTCCGCGATCCAGCGCAGCG 73397 Query 869355 CCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCT 869414 ||||||| ||||| ||| | | ||||||| || ||||| ||| || ||||| || Sbjct 73398 CCCAGTCCGCCTTCTTCTTGATGCACGGCACGGTCTCGATCGCGTCGAACAGGTGCTCGC 73457 Query 869415 TTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | ||| ||||||| ||||||||||| ||||||||||| ||||| Sbjct 73458 GCACATGCGGCTCCTTGATGTAGGTGTCGATGAGGAGCGAATACGTCTC 73506 Score = 141 bits (156), Expect = 1e-27 Identities = 177/242 (73%), Gaps = 3/242 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| || || | |||| || || || Sbjct 73508 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAACACCGCGCCTCGGCGACCTGC 73567 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| || |||||| || ||||||||| ||||| ||||| |||||||||| Sbjct 73568 ACCTCGTTGGAGAACCGCTCGAGGAGGTTCTCGTTGACGATCCCGTCCGAGGCGGCGAAA 73627 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGG 869809 || || ||||||||| |||||| | ||||||| |||| | ||| | |||||| Sbjct 73628 AAGGCGAGGACGTGCGAGATAAAATATCGCTCGTTGTCGTTCAGCCGGTTCTCCCAGTCC 73687 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | |||| |||||||| | |||||| || ||||||| || || ||||| || ||| Sbjct 73688 CAGAGGTCGTGACTGAGGTCGATCTCCTCAGCTGTCCAGAATGATGCTTCGGCTTTCTTG 73747 Query 869870 TA 869871 || Sbjct 73748 TA 73749 Score = 114 bits (126), Expect = 2e-19 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| | ||| || || ||| |||||| ||||| ||||| |||| ||||||||| Sbjct 76180 GCCTTCGAGTAGTCCGAGACTCGCTTCTCGAAGAAGTTTGTCTTACCCTGGAGCGAGATG 76121 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | ||| ||||| | || ||||| ||| | || |||| | Sbjct 76120 AGGTCCATGAAGTCGAAGGGGTTCGTCGCGTTGTACACCTTCGGGTCGCCAAGCGCGACA 76061 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 |||||||| || ||||| ||||||||||||||||||||||| || |||||||||||| Sbjct 76060 AGCAGGCGATCTGCGACGAACTCGATGTACTGGCACATGAGCTTCGCATTCATGCCGATG 76001 Query 868871 AGCGCCACCGGCAGCG 868886 || || |||||||| Sbjct 76000 AGTGCGCACGGCAGCG 75985 >seq126 Length=88319 Score = 116 bits (128), Expect = 5e-20 Identities = 107/133 (80%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG-CCGTG 19111 |||||||||||||| || |||||| || |||||| || || ||||||||| ||||| Sbjct 18351 ATCGGCGGCACGGTCACCTGCGTGATCCGGCGCGTGCCCGCGGGGCTCGGCGAGCCCGTG 18410 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 || |||||| ||||||| ||||||| ||||| ||||| |||||||| || ||||||| Sbjct 18411 -TTCGACAAGCTCGAGGCGGCGCTCGGGCACGCGATGCTCTCGATCCCCGCGACCAAGGC 18469 Query 19172 ATTCGAGATTGGC 19184 |||||| | ||| Sbjct 18470 GTTCGAGGTCGGC 18482 Score = 87.8 bits (96), Expect = 2e-11 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 19579 GGTGGCCTTTAAGCCGCCGGCCACGATCGGCTCCGCGCAGCAGACGTGCGAA-TACGGCG 19637 ||| | ||| ||| | || || |||||| |||||| |||| ||| | |||| || Sbjct 18677 GGTCGGCTTCAAGTCCCCCGCGACGATCTCGCAGGCGCAGGAGACC-GCGCAGTACGACG 18735 Query 19638 GCGAGCAGGCCACGTTGGAGGCGCGCGGGAGGCACGACCCGTGCGTCGTCGCGCGCGCGG 19697 || || || ||| | | ||||| || | ||||||||||| ||||| ||||||||| Sbjct 18736 GCACGCCGGGGACGCTCGCCGCGCGGGGCCGCCACGACCCGTGTGTCGTGCCGCGCGCGG 18795 Query 19698 TCCCCATCGTCGAGGCCATGGCGGCCATGGTCCTC 19732 | |||||||||||||| ||||| || || ||| || Sbjct 18796 TGCCCATCGTCGAGGCGATGGCTGCGATCGTCATC 18830 >seq37 Length=175141 Score = 111 bits (122), Expect = 2e-18 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1627869 GTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGGC 1627928 |||||| || |||||||| ||||| || |||||||| || |||| ||||||| ||||||| Sbjct 161433 GTCGGCAAGACCCTGCACACCGACACCGATCGGCCGATGACGCATGTTCGAGCGGCGGGC 161492 Query 1627929 CTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCT 1627987 |||||| | || |||| ||||| ||| || | ||||||||||||| | ||||||| Sbjct 161493 CTCGGGGATGGGATAGTAGTTGACGTCAATGATGCGGTTGAGGTTGAAGGCAACGACCT 161551 >seq100 Length=108983 Score = 105 bits (116), Expect = 8e-17 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||||| | ||||| |||| |||||||||||||||||||| | || | ||||| | Sbjct 20252 GCCTCGGTCGCAATGCGCTCGAAGATGTCGTTGACAAACGAGTTGAGGATGGCCATCGCC 20193 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||||||||| || ||||||||||||||||||||||| Sbjct 20192 TTGTTGGAGATACCGGTATCGGGGTGCACCTGCTTGAGCAC 20152 >seq204 Length=54078 Score = 87.8 bits (96), Expect = 2e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 ||||| || | ||||| || | || |||||||| |||||||| | || | ||||| | Sbjct 40188 GCCTCAGTCGCAATGCGCTCAAAGATATCGTTGACGAACGAGTTGAGGATAGCCATCGCC 40129 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||||||||| ||| || |||||||||||||||||||| Sbjct 40128 TTGTTGGAGATACCCGTATCAGGGTGCACCTGCTTGAGCAC 40088 >seq49 Length=155801 Score = 87.8 bits (96), Expect = 2e-11 Identities = 205/301 (68%), Gaps = 15/301 (5%) Strand=Plus/Plus Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 ||||||||||| | | || || || || |||| | ||||||||||||||| |||| Sbjct 45228 TTCTTGAAGCCCACCGGCATCGAGAGCGCTGACGTGAGCTCGCGGTGCACCTGCGACTCG 45287 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGC---CAAATAAGGGGCCACC 1726861 |||||||||||||| | |||||||||| || ||||| || | | |||| | | Sbjct 45288 GTCGTGCGCGCGCCGATCGCGCCCCACGAGACGAGGTCCGCGGTGTACTGCGGGGTGATC 45347 Query 1726862 AGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAAC 1726921 | ||| |||||| | | ||||| | | | | || ||| ||| ||| Sbjct 45348 ---GTGTCGAGGAACTCGCAGCCGGCGGGCAGGCC--CATCTTCG-CGATGTCGAGCAGG 45401 Query 1726922 AGGCG---GCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGG 1726978 | ||| |||||| |||| |||||| | | || | |||| | || ||| Sbjct 45402 A-GCGTACGCGCGA-GCCG-CAGGCCCCTGTTAATTTGGAAGCTGCCGTTCATCTCCGGG 45458 Query 1726979 TCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATG 1727038 ||| || |||||||||||||||||| ||||| |||||||| |||| ||| | |||||| Sbjct 45459 TCGTTGATCAGGCCCTTCCACCCGACCGTCGTCCGCGGCTTCTCGAAGTAGACCCGCATG 45518 Query 1727039 A 1727039 | Sbjct 45519 A 45519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107080769945704