Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq70 176 7e-38 seq37 111 2e-18 seq100 105 1e-16 seq204 93.3 7e-13 >seq70 Length=136885 Score = 176 bits (194), Expect = 7e-38 Identities = 238/330 (72%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || ||||| ||||| | ||||| || ||||||||||| || || ||||| Sbjct 73225 ACCCTCATCGCGGCTGATGAGCTCGTTCGAGAACGTCAGGCCGGGCATAAGACCACGCTT 73284 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||| | ||| ||| ||||| || ||||| ||||| ||||| || Sbjct 73285 CTTGAGCCAGAAGATCGACGCGAACGAGCCGGAGAAGAAAATGCCTTCGACCGCGGCGAA 73344 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCATCGC 794516 | || |||||||| | ||| || | | || ||||| |||||| || ||| Sbjct 73345 CGCAACAAGCCGCTCCGTAAACGT--CGA----CTTTTTGTCCGCGATCCAGCGCAGCGC 73398 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576 ||| || ||||| ||| | | | ||||| || ||||| ||| || ||||| || Sbjct 73399 CCAGTCCGCCTTCTTCTTGATGCACGGCACGGTCTCGATCGCGTCGAACAGGTGCTCGCG 73458 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 | | ||| ||||||| ||||||||||||||||||||| || ||||| ||||||||||| Sbjct 73459 CACATGCGGCTCCTTGATGTAGGTGTCGATGAGGAGCGAATACGTCTCGGAGTGGATGTT 73518 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || |||||||||||| || || || Sbjct 73519 CTCCATCATGATCTGGAAGCCGTAGAAACA 73548 Score = 176 bits (194), Expect = 7e-38 Identities = 216/293 (74%), Gaps = 9/293 (3%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 |||||||||||||| ||||||||||||||||| ||||| | ||| ||| ||||| Sbjct 75776 AGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGAGCCAGAGAAG 75717 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||| |||||||| || || ||| | | || |||||||| || | ||| ||| Sbjct 75716 AAGATACCCTCGACCGCTGCGAAGGCAATAAGACGCTCGGCGAACG-----AGGATTTCT 75662 Query 794497 TTGTT---GATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCG 794553 | || |||||| | ||||| || ||||| ||| | | |||| | |||||| Sbjct 75661 T-GTCCGAGATCCAACGGAGGGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCG 75603 Query 794554 ATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGC 794613 || ||| ||| ||||| || || |||||||||| |||||||||||||||||| Sbjct 75602 ATCGCGTCAAACAGGTGCTCACGCTGCGTGGGGTCCTTGATATAGGTGTCGATGAGGAGC 75543 Query 794614 GAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 ||||| ||||| ||||||||||| || || |||||||||||| || ||||| Sbjct 75542 GAGTACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCA 75490 Score = 147 bits (162), Expect = 3e-29 Identities = 138/176 (78%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976 |||||| |||||| || ||||||||||||| || || |||| ||||| | ||| Sbjct 72873 ACGCGCTTCTCGAAGAAATTGGTCTTGCCCTGCAGTGAAATCAGGTCCATGAAGTCGAAT 72932 Query 793977 GGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACG 794036 ||||| | | ||||||||| ||| ||||||||| | || |||||||| |||||| Sbjct 72933 GGGTTCGTGGCGTTGTAGTGCTTTTCGTTCCCGAGCGAGACCAGGAGGCGGTCCGCGACG 72992 Query 794037 AATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAG 794092 || || |||||||||||||| || | |||||||||||||||||| || |||||||| Sbjct 72993 AACTCGATGTACTGGCACATCAGCGGGGCGTTCATGCCGATGAGTGCAACGGGCAG 73048 Score = 114 bits (126), Expect = 2e-19 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 ||||||| ||||| | || || || ||| |||||| ||||| ||||| |||| || Sbjct 76188 TGACGCCAGCCTTCGAGTAGTCCGAGACTCGCTTCTCGAAGAAGTTTGTCTTACCCTGGA 76129 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||||| | ||||| | ||| ||||| | || ||| |||| | || | Sbjct 76128 GCGAGATGAGGTCCATGAAGTCGAAGGGGTTCGTCGCGTTGTACACCTTCGGGTCGCCAA 76069 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 ||| |||||||||| || |||||||| || ||||||||||||||||| || |||| Sbjct 76068 GCGCGACAAGCAGGCGATCTGCGACGAACTCGATGTACTGGCACATGAGCTTCGCATTCA 76009 Query 794071 TGCCGATGAGCGC-CACGGGCAGCG 794094 |||||||||| || ||| ||||||| Sbjct 76008 TGCCGATGAGTGCGCAC-GGCAGCG 75985 Score = 109 bits (120), Expect = 9e-18 Identities = 148/206 (72%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 ||||||| ||||||| || || ||||| || ||| || || |||||||| Sbjct 73544 AAACACCGCGCCTCGGCGACCTGCACCTCGTTGGAGAACCGCTCGAGGAGGTTCTCGTTG 73603 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||| ||||| ||||||||||||||||||||||||| |||||| | ||||||| | Sbjct 73604 ACGATCCCGTCCGAGGCGGCGAAAAAGGCGAGGACGTGCGAGATAAAATATCGCTCGTTG 73663 Query 796261 TCGCTGAGCGAG---ACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 ||| | ||| | |||||| |||| | |||||||| |||||| || ||| Sbjct 73664 TCGTTCAGCCGGTTCTCCCAGTCCCAGAGGTCGTGACTGAGGTCGATCTCCTCAGCTGTC 73723 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTA 796343 || || || || ||||| || ||||| Sbjct 73724 CAGAATGATGCTTCGGCTTTCTTGTA 73749 >seq37 Length=175141 Score = 111 bits (122), Expect = 2e-18 Identities = 148/199 (74%), Gaps = 14/199 (7%) Strand=Plus/Plus Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCG-GTTGAGGCGACGCGCGCC---GGCGCT 2070107 || |||||||||||||| || ||||| ||| |||||| |||| ||| |||| Sbjct 161347 GCAGCATGGTAGATCGTTTCGAAGATC-TGCTTGTTGAGCT--CGCGTGCCTCAGGCGA- 161402 Query 2070108 CTCCCACGGCAGGTCCAT---CATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCC 2070164 ||| | |||| | || |||| || | |||||| || |||||||| ||||| || Sbjct 161403 CTCGAAGGGCATGCGCAGAGCCATG---AAGGTGTCGGCAAGACCCTGCACACCGACACC 161459 Query 2070165 CATCGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTC 2070224 |||||||| || |||| ||||||| | ||||||||||| | || |||| ||||| ||| Sbjct 161460 GATCGGCCGATGACGCATGTTCGAGCGGCGGGCCTCGGGGATGGGATAGTAGTTGACGTC 161519 Query 2070225 GATCACGCGGTTGAGGTTG 2070243 || | ||||||||||||| Sbjct 161520 AATGATGCGGTTGAGGTTG 161538 >seq100 Length=108983 Score = 105 bits (116), Expect = 1e-16 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 |||||||| | ||||| |||| |||||||||||||||||||| | ||| | ||||| Sbjct 20252 GCCTCGGTCGCAATGCGCTCGAAGATGTCGTTGACAAACGAGTTGAGGATGGCCATCGCC 20193 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||||| || ||||||||||||||||||||||| Sbjct 20192 TTGTTGGAGATACCGGTATCGGGGTGCACCTGCTTGAGCAC 20152 >seq204 Length=54078 Score = 93.3 bits (102), Expect = 7e-13 Identities = 89/113 (79%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||| || | ||||| || | || |||||||| |||||||| | ||| | ||||| Sbjct 40188 GCCTCAGTCGCAATGCGCTCAAAGATATCGTTGACGAACGAGTTGAGGATAGCCATCGCC 40129 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAAA 1485716 ||||||||||| ||| || |||||||||||||||||||| || ||||||| Sbjct 40128 TTGTTGGAGATACCCGTATCAGGGTGCACCTGCTTGAGCAC--TGCAAACAAA 40078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916170661312568