Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq52 141 6e-29 seq1 123 2e-23 seq116 82.4 5e-11 >seq52 Length=153599 Score = 141 bits (156), Expect = 6e-29 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||||||||||||||||||||| ||||| || || |||| |||| || || Sbjct 49421 AGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCATCCTCGAGC 49362 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || |||||||| || || |||||||| |||| | ||||||||||| | || Sbjct 49361 TGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC 49302 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| |||| | || || || || || | ||| || ||||| || Sbjct 49301 TTGGCCTTGACGTTGTCTATAGTGTCCGAGGATTCCACCTCGAGGGTAATCGTCTTCCCT 49242 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| |||||||||||||| Sbjct 49241 GTCAGGGTCTTGACAAAGATCTGCAT 49216 Score = 127 bits (140), Expect = 1e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 |||| |||| ||||||||||||||| ||||| |||||||| || |||| | || || | Sbjct 49704 CCAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCTTCGA 49645 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 | ||||| || || |||||||| || |||||||| |||| | ||||||||||| | | Sbjct 49644 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAA 49585 Query 34890 TTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTC 34949 |||| ||||| | || | || || ||| || || | ||| |||||||| | Sbjct 49584 TTTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCCACCTCGAGGGTGATGGTCTTGC 49525 Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| | ||||| || || |||||||| Sbjct 49524 CCGTCAACGTCTTGACGAAAATCTGCAT 49497 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||||||||||||||| ||||| ||||| || || |||| |||| Sbjct 50272 AGGACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCTGAGAGCGTGCGACCATCT 50213 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || |||||||| |||| | |||||||| || Sbjct 50212 TCAAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTATCC 50153 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | || || ||| Sbjct 50152 TGGATCTTGGCCTTGACGTTGTCAATGGTATCGGACGACTCAACCTCCAGAGTGATCGTC 50093 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || | |||||| || || ||||||||| Sbjct 50092 TTGCCGGTCAAGGTCTTGACGAAAATCTGCATG 50060 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||||||||||||||||||||| ||||| || || | || |||| |||| Sbjct 49985 AGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGGCCATCCTCCAAC 49926 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || ||||| || || ||||| || | || | ||||||||||| | || Sbjct 49925 TGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGTGGGATACCCTCCTTGTCCTGGATC 49866 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || ||||| || | ||||| ||| | ||| || || | || || ||||| Sbjct 49865 TTGGCCTTGAC--AT--TGTCGATGGTGTCAGACGACTCAACCTCCAGAGTGATCGTCTT 49810 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || ||||| || || ||||||||| Sbjct 49809 GCCGGTCAGCGTCTTAACGAAAATCTGCATG 49779 >seq1 Length=721539 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| || || ||||| || | | | || | || Sbjct 158175 AGGACGAGGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGACCGTCC 158234 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 158235 TCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 158294 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| ||| || ||||| || | || |||||| Sbjct 158295 TGAATCTTCGCCTTCACGTTGTCGATCGTGTCAGAGGATTCGACCTCGAGCGTGATGGTC 158354 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| |||||||| || |||||||||||| Sbjct 158355 TTGCCCGTCAGGGTCTTGACGAAGATCTGCATG 158387 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| | || | |||||| || |||| || |||||||||||||| || || || Sbjct 157416 CCTCCACGCAGACGCAGGACGAGATGAAGAGTCGATTCCTTCTGAATGTTGTAATCAGAA 157475 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || ||||| | || ||||| ||||| || |||||||| || |||||||| || | || Sbjct 157476 AGAGTGCGCCCGTCCTCCAGCTGCTTGCCAGCGAAGATAAGACGTTGCTGATCAGGAGGA 157535 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||||| || | || || || ||| | |||| ||| || |||||| Sbjct 157536 ATACCCTCCTTATCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCAGAGGACTCGACC 157595 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | || || ||||| ||||| | |||||||| |||||||||||| Sbjct 157596 TCCAACGTGATCGTCTTGCCCGTCAACGTCTTTACGAAGATCTGCATG 157643 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| || ||||| || || | |||| | || Sbjct 157659 AGGACGAGGTGCAGGGTAGACTCCTTCTGGATATTATAATCGGACAACGTGCGACCGTCC 157718 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || ||||| || | || | ||||||||||| Sbjct 157719 TCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGATCGGGAGGGATACCCTCCTTGTCC 157778 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| ||| || |||||| || | || || ||| Sbjct 157779 TGAATCTTCGCCTTCACGTTGTCGATCGTGTCAGAGGACTCGACTTCGAGCGTGATTGTC 157838 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| ||||| || ||||||||||| Sbjct 157839 TTCCCCGTGAGAGTCTTCACGAAGATCTGCAT 157870 Score = 96.9 bits (106), Expect = 2e-15 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || || || || |||| |||| ||||| ||||| || ||||| Sbjct 157967 CTCCTTCTGAATGTTGTAATCTGACAGTGTGCGACCATCCTCCAGCTGCTTGCCAGCGAA 158026 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || ||||| || | || | |||||||| || | || || ||||| | Sbjct 158027 AATGAGACGCTGCTGATCAGGGGGGATACCCTCCTTATCCTGAATCTTCGCCTTGAC--A 158084 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | ||||||| ||| | |||||| || | || |||||||| || || | |||| Sbjct 158085 T--TATCGATTGTGTCAGATGACTCGACCTCGAGTGTGATGGTCTTGCCGGTCAATGTCT 158142 Query 34962 TTACAAAGATCTGCATG 34978 | || |||||||||||| Sbjct 158143 TAACGAAGATCTGCATG 158159 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || ||||||||| ||||| || ||||| || | | | || Sbjct 157203 AGAACAAGGTGAAGTGTAGACTCCTTCTGGATGTTGTAATCCGACAGCGTCCTGCCGTCC 157262 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||||||||| || || || || | || | |||||||| || Sbjct 157263 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCGGGGGGAATGCCCTCCTTATCC 157322 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | ||| || || | ||| || ||| Sbjct 157323 TGAATCTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCTACCTCCAGGGTGATCGTC 157382 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| ||||| ||||| || |||||||||||| Sbjct 157383 TTTCCAGTGAGCGTCTTGACGAAGATCTGCATG 157415 >seq116 Length=96108 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||| | ||| ||||||||| ||||| ||||| ||| |||| |||| Sbjct 9773 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 9832 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||| ||||||||||| || || |||||||| Sbjct 9833 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTC 9870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689973800728