Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq70 96.9 5e-15 >seq70 Length=136885 Score = 96.9 bits (106), Expect = 5e-15 Identities = 219/326 (67%), Gaps = 9/326 (3%) Strand=Plus/Plus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 |||||||| | || || | ||||| || || || || || ||||| ||||||||||| Sbjct 73226 CCCTCATCGCGGCTGATGAGCTCGTTCGAGAACGTCAGGCCGGGCATAAGACCACGCTTC 73285 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757 |||||||| || || | || || || || || ||||| |||||||| || || || || Sbjct 73286 TTGAGCCAGAAGATCGACGCGAACGAGCCGGAGAAGAAAATGCCTTCGACCGCGGCGAAC 73345 Query 39758 GCAACAAGTCTCTCTCCGT-AACTTGTATCATTATGT-----ATCCACTTCTGTGCCCAA 39811 |||||||| | |||||| ||| | | | || ||| ||||| | | ||||| Sbjct 73346 GCAACAAG--CCGCTCCGTAAACGTCGA-CTTTTTGTCCGCGATCCAGCGCAGCGCCCAG 73402 Query 39812 TCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCA 39871 || || |||||||| | || |||| || || || || | || || | | || Sbjct 73403 TCCGCCTTCTTCTTGATGCACGGCACGGTCTCGATCGCGTCGAACAGGTGCTCGCGCACA 73462 Query 39872 TCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCA 39931 | || || | || || || || | || |||| | || || |||||||| || Sbjct 73463 TGCGGCTCCTTGATGTAGGTGTCGATGAGGAGCGAATACGTCTCGGAGTGGATGTTCTCC 73522 Query 39932 ATCGCCATCTGAAATCCGTAAAAACA 39957 ||| ||||| || ||||| ||||| Sbjct 73523 ATCATGATCTGGAAGCCGTAGAAACA 73548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686902686511680