Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq52 104 2e-17 seq1 98.7 8e-16 >seq52 Length=153599 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || ||||| |||||||| || |||| | || |||||||| || || ||| | Sbjct 49406 TCCTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAG 49347 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||||||||| || || ||||| | ||||| || || ||||||| || | | | Sbjct 49346 ATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 49287 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 |||| |||||| | || ||| || || || || || | || || ||||| || || ||| Sbjct 49286 TCTATAGTGTCCGAGGATTCCACCTCGAGGGTAATCGTCTTCCCTGTCAGGGTCTTGACA 49227 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 49226 AAGATCTGCATA 49215 >seq1 Length=721539 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || |||||||||||| || | | || |||| || ||||| || ||| Sbjct 158190 GTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGACCGTCCTCCAGCTGCTTGCCG 158249 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || |||||||| || || || || | ||||| || || ||||| ||| Sbjct 158250 GCGAAGATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTC 158309 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | || ||| || || || || || | ||||||||||| || Sbjct 158310 ACGTTGTCGATCGTGTCAGAGGATTCGACCTCGAGCGTGATGGTCTTGCCCGTCAGGGTC 158369 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 158370 TTGACGAAGATCTGCAT 158386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930712631744