Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq109 102 1e-16 seq70 93.3 5e-14 >seq109 Length=99073 Score = 102 bits (112), Expect = 1e-16 Identities = 209/311 (67%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 182549 ATCTGTCATAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCC 182608 ||| | ||| ||||| || ||||| || |||| ||||| |||||| || Sbjct 39142 ATCAGCCATGATCATGAGCTTGCCATATCGGAGTTGGTTGACATCGCTGTAGTCCTTGTT 39083 Query 182609 TTGTTGAAGACCAAGGATCTTCTTGAGATCATTGAACTCCTGGTTTGATGTAAGCTGTGC 182668 || || | ||| ||||||||||||| || | || ||||| ||| ||| ||| | Sbjct 39082 GTGCTGCAAACCCAGGATCTTCTTGATATTCTGGATCTCCTCGTTCTTCATAATCTGGTC 39023 Query 182669 CACCGAAGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATC 182728 | ||||| || ||||| | || || ||||| ||||| |||||| ||| ||| Sbjct 39022 GTGCTTTGCGTCTCGCACATTGAGCAACTTGCCACGAAGGGGGAAGACACCGAAGTTATC 38963 Query 182729 ACGACCAACGACAGAGAGACCCGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGAC 182788 || || |||||| ||||||||| || || || | ||||| || || || || |||| Sbjct 38962 GCGGCCGACGACACCGAGACCCGCCACAGCCAGAGACTTCGCAGAGTCTCCTTCAGTGAG 38903 Query 182789 AATGAGAGTACACTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCGTCATCCAACTTGGG 182848 ||||| ||||| | || || || || || ||||| |||||| | ||| || Sbjct 38902 GATGAGCGTACATTCGGAAGCTTTCTTCGATCCGGCATTGTTAGCGTCAGAGAGCTTAGG 38843 Query 182849 AATACCGGTAA 182859 || ||| |||| Sbjct 38842 AAGACCCGTAA 38832 >seq70 Length=136885 Score = 93.3 bits (102), Expect = 5e-14 Identities = 131/179 (73%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 122644 TTGAAGAGCTC-CACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATT 122702 ||||||||| |||| | || || ||| | ||||||||| ||| || || || || Sbjct 75845 TTGAAGAGCAGGCACG-CGAAGTCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTT 75787 Query 122703 TGAGAAGCATAGACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATG 122761 ||||| || || ||||||||||| |||||||| | ||| | || | ||| ||| | Sbjct 75786 CGAGAACGTCAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATCGACGC-GAACG 75728 Query 122762 ACCCGGAGAAGAAGATACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 | || ||||||||||||||||| || || || |||| ||| || |||||||| ||| Sbjct 75727 AGCCAGAGAAGAAGATACCCTCGACCGCTGCGAAGGCAATAAGACGCTCGGCGAACGAG 75669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628026410515200