Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq123 113 4e-20 >seq123 Length=89085 Score = 113 bits (124), Expect = 4e-20 Identities = 192/276 (70%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 30185 TGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCC 30243 |||||||||||||| || || | || ||||| | || |||| |||| || || || Sbjct 60566 TGCAGCTGATCCACTCCTTGGCCAGTATAATCTGCATCGCA-GTCCTTGTAATCGGCGCC 60508 Query 30244 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 30303 || || ||||| |||||||| || |||||||||| ||| ||||| | || | | Sbjct 60507 AAAGTGTCTCCATTGGAACCCATATACCGGTCCCAAGTCACCCTCCCTACGATGTCCCAG 60448 Query 30304 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30363 ||| | | | ||||| || || |||| || || | ||||||||||| || ||||||| Sbjct 60447 GCCACGCCTCTCCAAGAATTCCTTGGATCCATTACCATCCCAGATCTTCACTCCCTTCTT 60388 Query 30364 AGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30423 || ||| |||||| ||| || || |||||| || |||||||| |||| | | Sbjct 60387 GGACAGCAGAGTGGAGTCAGTGCTTCCGTGGATGAACCAAAGGAGCTCCTCGACGATGCC 60328 Query 30424 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 | |||| | || ||||| || |||||||| Sbjct 60327 GCGCAGAAAGGTACGTTTTGTCGTTAGAAGGGGAAA 60292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406306874241504