Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq123 116 3e-21 >seq123 Length=89085 Score = 116 bits (128), Expect = 3e-21 Identities = 193/276 (70%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 27451 TGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTGTACTCTGCTCC 27509 |||||||||||||| || || | || ||| | | || |||| |||| || || || Sbjct 60566 TGCAGCTGATCCACTCCTTGGCCAGTATAATCTGCATCGCA-GTCCTTGTAATCGGCGCC 60508 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 27569 || || |||||||||||||| || |||||||||| ||| ||||| | || | | Sbjct 60507 AAAGTGTCTCCATTGGAACCCATATACCGGTCCCAAGTCACCCTCCCTACGATGTCCCAG 60448 Query 27570 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 27629 ||| | | | ||||| || || |||| || || | ||||||||||| || ||||||| Sbjct 60447 GCCACGCCTCTCCAAGAATTCCTTGGATCCATTACCATCCCAGATCTTCACTCCCTTCTT 60388 Query 27630 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 27689 ||| ||| |||||| ||| || || |||||| || |||||||| |||| | | Sbjct 60387 GGACAGCAGAGTGGAGTCAGTGCTTCCGTGGATGAACCAAAGGAGCTCCTCGACGATGCC 60328 Query 27690 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 | |||| | || ||||| || |||||||| Sbjct 60327 GCGCAGAAAGGTACGTTTTGTCGTTAGAAGGGGAAA 60292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369503993601272