Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq117 114 1e-20 seq86 111 2e-19 >seq117 Length=117856 Score = 114 bits (126), Expect = 1e-20 Identities = 374/580 (64%), Gaps = 11/580 (2%) Strand=Plus/Minus Query 16183 TAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAG 16242 |||||| | ||| || ||||| ||||||||| ||||| |||||||| | || || || Sbjct 88552 TAGGTGCTCAAAGATGAGACAAGCGAAGTCGGTGTGTAGGCCTTCGTCGCGGCATATGAG 88493 Query 16243 TTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGC 16302 ||||||||||| | | ||| ||||| ||||||||||| | |||||| || || || Sbjct 88492 CTCGTTGGAAAACGAAAGCCCAGGCATGAGCCCTCGTTTCTTCAGCCAGAAGATTGCGGC 88433 Query 16303 AAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTA 16362 || || ||||| || || |||||||| || | || || || | | | | | | Sbjct 88432 GAAAGAGCCCGAGAAAAAGATACCCTCCACCGCTGAGAATGCCACCAGCCTGATAGAGAA 88373 Query 16363 CGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATC 16422 | || | | ||||| | ||||||| || ||| | | || Sbjct 88372 TGGCGCGCTCCGGTCCCCGATCCAACGTAGAGCCCATTCCGCCTTTCTCTGAACGCAGGG 88313 Query 16423 CATCGTTTCTATGGCCTTAAACA----ATTTCTCTTTTTCCTGAATATCGATTATATACG 16478 | ||| || ||||| || || | ||||||| || |||| | | | Sbjct 88312 AACCGTCTCGATGGCGTTGAAGAGATGATTTCTC----TCGATGGGATCGCCGACGAAGG 88257 Query 16479 TATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCAT 16538 |||||||||| | ||| | || ||||| |||||||| ||||| || || || || | Sbjct 88256 TATCAATCAGGAGGGAGTAAGTCTCCGAGTGAATGTTCTCCATGGCAATTTGGAAGCCGT 88197 Query 16539 AGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCAT 16598 ||||||| || ||||| || | || ||||| | ||| || || | |||||||| | Sbjct 88196 AGAAGCAGCGCGCCTCGGCGACCTGAACTTCGGCCGCAAAGCGCTCAACGAGGTTCTCGT 88137 Query 16599 TCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGT 16658 |||| ||||| || || || || || || | || || ||||| | |||| Sbjct 88136 TCACAATACCATCCGAGGCGGCGAAGAATGCGAGGATATGGGAGATGAAGTGACGCTCGT 88077 Query 16659 CAGATGTAAGAATATG---CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCG 16715 | || || || |||| ||||| | || || | | ||| | ||||| | || Sbjct 88076 CCGAGGTGAGTGTATGATTCCAATGAGAGATGTCCTTTGCCAGATCGATCTCTTCAGCCG 88017 Query 16716 TCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 |||| ||||||||| | || ||| ||||||| ||| || Sbjct 88016 TCCAGAAGCTAGCCTCCGCGCGTTTGTACATTTCCCATAT 87977 >seq86 Length=145559 Score = 111 bits (122), Expect = 2e-19 Identities = 289/441 (66%), Gaps = 0/441 (0%) Strand=Plus/Minus Query 16192 AAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGA 16251 ||||| || ||| ||||||||| ||| | |||||||| | || ||||| || || Sbjct 4150 AAACAGTAAACAGGCGAAGTCGGTATGCATGCCTTCGTCGCGAGAAATGAGTTCATTTGA 4091 Query 16252 AAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCC 16311 ||||| | || ||||| || |||||||| | ||| || || | || || || || Sbjct 4090 GAAAGTAAGGCCGGGCATCAAGCCGCGTTTCTTGAGCCAAAAGATGGACGCGAACGAGCC 4031 Query 16312 CGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATC 16371 || ||||| || || || |||| |||||||||| || ||||| ||| |||| | || Sbjct 4030 GGAGAAGAAGATGCCTTCGACAGCAGCAAAAGCGACTAGGCGTTCAGCGAACGTCGATTC 3971 Query 16372 TTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTC 16431 || | ||||| | || |||| || ||||| | || | ||| ||||| || Sbjct 3970 CTTGTCGGATATCCAGCGCAGTGCCCAGTCCGCTTTCTTCTTCACACATGGGATCGTGTC 3911 Query 16432 TATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAA 16491 ||| || | |||| | ||| || | || | || ||||| || || || | Sbjct 3910 TATCGCGTCGAACAGGTACTCGCGTTGAGCAGCGTCCTTGATGTACGTGTCGATGAGCAG 3851 Query 16492 ACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGC 16551 || | || || ||||| ||||| || ||||| || || ||||| | || || Sbjct 3850 GGAATAAGTCTCCGAATGTATATTCTCCATCATAATCTGGAAGCCGTAGAAAGAGCGCGC 3791 Query 16552 CTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 || | | ||| ||||| | || || || | ||||||||||| ||||| ||||| Sbjct 3790 TTCAGGTGCTTGAACTTCGTTTGAGAAGCGCTCTACGAGGTTCTCATTGACGATGCCGTC 3731 Query 16612 ACTTGCAGCAAAAAACGCCAA 16632 || || || || ||||| Sbjct 3730 CGAAGCTGCGAAGAAGGCCAA 3710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511407419193440