Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq97 111 2e-19 seq378 95.1 1e-14 >seq97 Length=131314 Score = 111 bits (122), Expect = 2e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193 ||| ||||| ||| ||| || |||||||||| | || |||||||| ||||||| Sbjct 124538 ACAAGCGAACTCGGTGTGGAGGCCCTCGTCTCGAGAGATCCTCTCGTTGGAGTACGTGAG 124597 Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253 || |||| || |||||||| || ||||||||||| ||||| || |||||||| ||||| Sbjct 124598 ACCTGGCAGGAGACCACGCTTCTTGAGCCAAAATATTGACGCGAACGATCCAGAGAAGAA 124657 Query 24254 AATTCCTTC 24262 ||||||||| Sbjct 124658 AATTCCTTC 124666 >seq378 Length=27749 Score = 95.1 bits (104), Expect = 1e-14 Identities = 333/516 (65%), Gaps = 8/516 (2%) Strand=Plus/Minus Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236 || || ||||| ||||| |||||||||||||| | ||| || ||||| ||||| | || Sbjct 7329 TCATTCGAAAATGTGAGGCCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCG 7270 Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGC-AAAGGCAATAAGTCTTTCTCCATA 24295 || ||||| |||||||| || || || |||||||| |||| || ||| || | | | Sbjct 7269 AAGGATCCTGAAAAGAATATACCCTCCACTGCCGCGAAAGCCACTAA-TCGCACGGCGAA 7211 Query 24296 ACCGGCGCT---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 24352 || || |||| ||||||||| | ||||| || |||||| || || Sbjct 7210 TGAGGACCTCTCGTCAGCGATCCACTTTAGCGCCCACTCTCCCTTCTCCGAAACGGTCGG 7151 Query 24353 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 24412 ||| || | ||| ||| || | | | ||| ||||| | || || | Sbjct 7150 CATGGTGGTCAGAGCTGCAAATAGTTTGGTGCGTTCGCGTGGATCTTGGATGTACGTCTG 7091 Query 24413 AATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 24472 ||||| || ||| | || ||||||| ||| || || || || || || ||||| Sbjct 7090 GATCAAGAGGGAGTACGTCTCTGAATGAACGTTCTCCATCATGATCTGGAAACCATAGAA 7031 Query 24473 ACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCAC 24532 ||| | || || | || || || || | ||||| ||| | | || || ||||| Sbjct 7030 ACACCGTGCTTCCGCAACTTGCACCTCAGCGCTGAATCGCTCTACGAGGTTCTCGTTCAC 6971 Query 24533 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGG 24592 |||||||| || || || || || | || ||| || || |||| | | Sbjct 6970 GATTCCGTCGGATGCGGCGAAGAAGGCGAGGACGTGTGAGATGAAGCGCCTTTCTCCGTG 6911 Query 24593 TGTTAGTT---TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCA 24649 || |||| | | ||| ||| | |||||| || | ||| | |||||| ||||| Sbjct 6910 GGTGAGTTTCGTGTGCCAGTCAAGTAGATCTTTGGACAGATCTATTTCTTCGGAAGTCCA 6851 Query 24650 AAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 24685 || ||||| | |||| ||||||||| |||| || Sbjct 6850 GAACGATGCTTGCGCCTGTTTATACATTCTCCATAT 6815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593713495700160