Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 seq220 98.7 8e-16 seq379 95.1 1e-14 seq339 87.8 2e-12 >seq13 Length=301256 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| || || | ||||| || ||||||| ||||| ||||| Sbjct 245384 GTAGACTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCA 245443 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| ||| | ||| |||||||| |||||| ||| Sbjct 245444 GCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC 245503 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| ||| ||| | ||| || | || |||||||||||||| | ||| Sbjct 245504 ACATTGTCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGCGTC 245563 Query 21159 TTGACAAATATTTGCAT 21175 || || ||||| ||||| Sbjct 245564 TTCACGAATATCTGCAT 245580 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | || | || |||||||| |||||||| ||||| | Sbjct 245071 CCGCCGCGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 245130 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| ||||| ||||| || | || | | |||||||||| || Sbjct 245131 AGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 245190 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || |||||| || || | | ||| |||||| | ||| Sbjct 245191 ATACCCTCCTTATCCTGGATCTTCGCCTTGACGTTGTCGATGGTATCAGAAGACTCGACC 245250 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || ||||| ||||| || || ||||| Sbjct 245251 TCGAGCGTGATGGTCTTGCCAGTCAACGTCTTGACGAAGATCTGCAT 245297 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||| | ||| || | |||| || |||||||| |||||||| || |||| Sbjct 244843 CCACCACGCAAGCGGAGGACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGAG 244902 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| || ||||| | || || | ||||||||| || Sbjct 244903 AGAGTGCGACCATCCTCAAGCTGCTTCCCCGCGAAGATCAGACGCTGCTGGTCGGGCGGG 244962 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| ||||| | | | | || || | ||| Sbjct 244963 ATTCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCAATTGTGTCCGATGACTCGACC 245022 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| || ||||||||||| || || ||||| || |||||||| Sbjct 245023 TCCAAGGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 245069 >seq220 Length=67240 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| || || | ||| || || ||||||| ||||| |||||| Sbjct 23365 GTGGACTCCTTCTGGATGTTGTAATCAGACAGCGTACGGCCGTCCTCGAGCTGCTTGCCC 23424 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | ||||| | ||||||||| || | || |||||||| |||||| || Sbjct 23425 GCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTG 23484 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | || ||| || | ||| |||||||||||||| | || Sbjct 23485 ACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTC 23544 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 23545 TTCACGAAGATCTGCAT 23561 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | |||| ||| |||||| || ||||| || |||| Sbjct 22481 CCACCACGCAGACGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAG 22540 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| ||||| || | || | | |||||||||| || Sbjct 22541 AGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 22600 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | ||| || || | |||| Sbjct 22601 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCGGACGACTCCACC 22660 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| ||||| ||||| || || ||||| Sbjct 22661 TCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 22707 >seq379 Length=45813 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||||||||| | || || || | ||||| ||||| ||||| Sbjct 39390 GTAGACTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 39449 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | ||||| | ||||||||| || | ||| |||||||| |||||| || Sbjct 39450 GCGAAGATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 39509 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || ||| || | ||| |||||||||||||| | || Sbjct 39510 ACATTGTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 39569 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 39570 TTGACGAAAATCTGCAT 39586 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||||| || |||||||| || || || ||||||| || || || | ||||| ||||| Sbjct 38823 ATGCAGCGTAGACTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGCTG 38882 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 ||||| || | || || | ||||||||| || | ||| |||||||| |||||| Sbjct 38883 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTT 38942 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 ||||| | | ||| || || || ||| |||| || || ||||||||||| Sbjct 38943 CGCCTTCACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCGGT 39002 Query 21152 TAACGTTTTGACAAATATTTGCAT 21175 | ||| || ||||| || ||||| Sbjct 39003 GAGCGTCTTTACAAAGATCTGCAT 39026 >seq339 Length=34629 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| |||||| || ||||||| ||||| ||||| Sbjct 18840 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 18781 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| || | || |||||||| |||||| || Sbjct 18780 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTGGCCTTG 18721 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || ||| || | ||| ||||| ||||| || | || Sbjct 18720 ACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTC 18661 Query 21159 TTGACAAATATTTGCATTTTGAA 21181 ||||| || || ||||| |||| Sbjct 18660 TTGACGAAAATCTGCATCGTGAA 18638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422253580257872