Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq379 140 3e-28 seq339 140 3e-28 seq13 140 3e-28 seq220 122 8e-23 seq60 89.7 4e-13 >seq379 Length=45813 Score = 140 bits (154), Expect = 3e-28 Identities = 159/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| |||||||| || || ||||| || ||| | ||||| |||||| Sbjct 39377 ACCAAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCCTC 39436 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| |||| || |||||||| |||||||| |||||||||||||| Sbjct 39437 GAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 39496 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | | ||||||||| | ||| | || || Sbjct 39497 GATCTTGGCCTTGACATTGTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTT 39556 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 |||||| || || || || ||||||||||||| Sbjct 39557 GCCGGTGAGGGTCTTGACGAAAATCTGCATGG 39588 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || || ||||| || | ||||| |||||| ||||| || || Sbjct 38830 GTAGACTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGCTGCTTGCCG 38889 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || |||||||| || || || |||||||||||||| || || || Sbjct 38890 GCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC 38949 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||||| | ||||||||| | || | ||| |||||||| || || Sbjct 38950 ACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCGGTGAGCGTC 39009 Query 118722 TTTACAAAAATCTGCATG 118739 |||||||| ||||||||| Sbjct 39010 TTTACAAAGATCTGCATG 39027 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| || | ||||||| ||||| ||||| || || ||| | Sbjct 38554 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCCTCAAGCTGCTTGCCGGCGAA 38613 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| || |||||||| || || || |||||||||||||| || || || || | Sbjct 38614 GATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTT 38673 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 || | ||||||| | ||| ||||||| || | || |||||||||| || || || Sbjct 38674 GTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCGGTCAAGGTCTTCAC 38733 Query 118727 AAAAATCTGCAT 118738 || |||||||| Sbjct 38734 GAAGATCTGCAT 38745 >seq339 Length=34629 Score = 140 bits (154), Expect = 3e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||||||| ||||| ||||| ||||| || ||| Sbjct 18840 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 18781 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| ||||||| |||||||| ||||| || || ||||||||||| || || || Sbjct 18780 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTGGCCTTG 18721 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||||| | ||||||||||| ||| | |||||||| || || || Sbjct 18720 ACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTC 18661 Query 118722 TTTACAAAAATCTGCAT 118738 || || ||||||||||| Sbjct 18660 TTGACGAAAATCTGCAT 18644 >seq13 Length=301256 Score = 140 bits (154), Expect = 3e-28 Identities = 160/214 (75%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 118529 CACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT 118587 ||||||| || | |||||||| || || |||||||| ||| || || || ||||| Sbjct 245651 CACCAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTCCGACCATCCT 245710 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | ||||| || ||||| ||||||| |||||||| |||||||| |||||||||||||| Sbjct 245711 CAAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCT 245770 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | |||| |||||| | | ||||||||||| || | || | Sbjct 245771 GGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCT 245830 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 118741 |||| || ||||| || || || ||||||||||| Sbjct 245831 TGCCAGTGAGAGTCTTAACGAAGATCTGCATGGC 245864 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || |||||||||||||| | |||||| |||||| ||||| || || Sbjct 244873 GTCGACTCCTTCTGAATGTTGTAATCCGAGAGAGTGCGACCATCCTCAAGCTGCTTCCCC 244932 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| ||||||||||| ||||| || || ||||||||||| ||| || || Sbjct 244933 GCGAAGATCAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCCTGAATCTTCGCCTTC 244992 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||||| ||||||||| | ||| | ||| |||||||||| || Sbjct 244993 ACGTTGTCAATTGTGTCCGATGACTCGACCTCCAAGGTGATCGTCTTGCCGGTCAAGGTC 245052 Query 118722 TTTACAAAAATCTGCATG 118739 || || || || |||||| Sbjct 245053 TTGACGAAGATTTGCATG 245070 Score = 120 bits (132), Expect = 3e-22 Identities = 154/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | |||||||| || || |||||||||||| | || || ||||| Sbjct 245371 ACCAAGATGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTC 245430 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| ||||||| |||||||| || || || |||||||||||||| Sbjct 245431 GAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 245490 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | ||||||||||| || | || || Sbjct 245491 GATCTTCGCCTTCACATTGTCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTT 245550 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||||| || || || || || ||||||||| Sbjct 245551 GCCGGTGAGCGTCTTCACGAATATCTGCATG 245581 >seq220 Length=67240 Score = 122 bits (134), Expect = 8e-23 Identities = 155/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | || ||||| || || ||||||||||| || || || ||||| Sbjct 23352 ACCAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGCGTACGGCCGTCCTC 23411 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| || |||||||| |||||||| || ||||||||||| Sbjct 23412 GAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTG 23471 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||| || ||| ||||||| ||| | || || Sbjct 23472 GATCTTGGCCTTGACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTT 23531 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 |||||| || || || || || |||||||||| Sbjct 23532 GCCGGTAAGGGTCTTCACGAAGATCTGCATGG 23563 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || ||||||||||| | |||||| |||||||||||| || || ||| | Sbjct 22516 CTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAA 22575 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| | |||||||| || || || |||||||||||||| || || || || | Sbjct 22576 GATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 22635 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | ||| ||||||| || | || |||||||||| || || || Sbjct 22636 GTCGATCGTGTCGGACGACTCCACCTCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGAC 22695 Query 118727 AAAAATCTGCATG 118739 || ||||||||| Sbjct 22696 GAAGATCTGCATG 22708 >seq60 Length=177480 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||| ||||| | || || ||||||| Sbjct 141873 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTACGGCCATCCTCG 141932 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||||| || |||||| ||||||| ||||||||||| || || || Sbjct 141933 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAAT 141976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433824626259664