Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq379 138 1e-27 seq220 136 5e-27 seq339 122 1e-22 seq13 120 3e-22 >seq379 Length=45813 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| ||||| ||||| |||| ||||| ||| |||| || |||||||| || Sbjct 38549 GTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCCTCAAGCTGCTTGCCG 38608 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 ||||| || || ||||||||||| | ||| | || |||||||||| ||| || ||| Sbjct 38609 GCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 38668 Query 43107 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 43165 | ||| | | | |||||| || || || |||| ||||||||| ||||| || | || Sbjct 38669 A-CGTTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCGGTCAAGGT 38727 Query 43166 CTTTACAAAGATTTGCAT 43183 ||| || ||||| ||||| Sbjct 38728 CTTCACGAAGATCTGCAT 38745 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| || | || || || | || || |||||||| || ||||| Sbjct 38835 CTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAA 38894 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | ||| | || |||||||||| ||| || || | ||| Sbjct 38895 GATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 38953 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || || | |||||| || ||||| || |||||||||| Sbjct 38954 TGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCGGTGAGCGTCTTTA 39013 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 39014 CAAAGATCTGCAT 39026 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || || || || | || || || | || || |||||||| |||||||| Sbjct 39395 CTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 39454 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||||| || | || |||||||||| ||| || |||| | Sbjct 39455 GATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 39514 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 39515 GTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 39574 Query 43172 AAAGATTTGCAT 43183 || || ||||| Sbjct 39575 GAAAATCTGCAT 39586 >seq220 Length=67240 Score = 136 bits (150), Expect = 5e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||| | |||| ||||||||||| || || |||||||| | || || ||| | Sbjct 22492 ACGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGCCC 22551 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| || | ||||||||||| | ||| | || |||||| Sbjct 22552 ATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 22611 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| || || | ||| | | | ||||||| ||| ||||| |||| ||||| Sbjct 22612 GTCCTGGATCTTCGCCTTCA-CGTTGTCGATCGTGTCGGACGACTCCACCTCGAGCGTGA 22670 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| ||||| || | |||||| || ||||| ||||| Sbjct 22671 TGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 22707 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || |||||||||| ||| || || |||| || |||||||| || ||||| Sbjct 23370 CTCCTTCTGGATGTTGTAATCAGACAGCGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAA 23429 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||||| || | | |||||||||| ||| || |||| | Sbjct 23430 GATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 23489 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 23490 GTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTCAC 23549 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 23550 GAAGATCTGCAT 23561 >seq339 Length=34629 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||| || || |||| || |||||||| |||||||| Sbjct 18835 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 18776 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| ||| | | |||||||||| ||| || |||| | Sbjct 18775 GATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 18716 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || |||| ||||||||||||||||| || ||||| || Sbjct 18715 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGAC 18656 Query 43172 AAAGATTTGCAT 43183 || || ||||| Sbjct 18655 GAAAATCTGCAT 18644 >seq13 Length=301256 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||| ||||| | || || |||||||| ||||| || Sbjct 245670 CTCCTTCTGGATGTTGTAGTCGGACAGCGTCCGACCATCCTCAAGCTGCTTCCCAGCAAA 245729 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||||||| ||| || |||| ||| Sbjct 245730 GATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 245788 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || || || |||| |||||||| ||||| || || ||||| | Sbjct 245789 TGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTTAA 245848 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 245849 CGAAGATCTGCAT 245861 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || |||||||| | || || || |||| || |||||||| |||||||| Sbjct 245389 CTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 245448 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 245449 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 245508 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||| || || |||| ||||||||| ||||| || |||||||| || Sbjct 245509 GTCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGCGTCTTCAC 245568 Query 43172 AAAGATTTGCAT 43183 || || ||||| Sbjct 245569 GAATATCTGCAT 245580 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| |||||||| | ||||| || | || || |||||||| || ||||| Sbjct 244878 CTCCTTCTGAATGTTGTAATCCGAGAGAGTGCGACCATCCTCAAGCTGCTTCCCCGCGAA 244937 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||||| ||| | | |||||||||| ||| | || | | ||| Sbjct 244938 GATCAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCC-TGAATCTTCGCCTTCACGT 244996 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || || | ||||| || ||||| || | ||||| | Sbjct 244997 TGTCAATTGTGTCCGATGACTCGACCTCCAAGGTGATCGTCTTGCCGGTCAAGGTCTTGA 245056 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 245057 CGAAGATTTGCAT 245069 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| || | || || || |||| || |||||||| || ||||| Sbjct 245106 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAA 245165 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | ||||||||||| | ||| | | |||||| ||| ||| || |||| ||| Sbjct 245166 GATCAAGCGCTGCTGGTCCGGCGGGATACCCTCCTTATCCTGGATCTTCGCCTTGA-CGT 245224 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || || || || |||| ||||||||| ||||| || | |||||| | Sbjct 245225 TGTCGATGGTATCAGAAGACTCGACCTCGAGCGTGATGGTCTTGCCAGTCAACGTCTTGA 245284 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 245285 CGAAGATCTGCAT 245297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571809794689760