Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq13 138 7e-28 seq379 123 2e-23 seq220 123 2e-23 seq339 118 7e-22 >seq13 Length=301256 Score = 138 bits (152), Expect = 7e-28 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| ||||| || |||| |||| || | ||||||||| ||||| Sbjct 245390 TCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 245449 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| ||| | || ||||||||| ||||| ||| | || | Sbjct 245450 ATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTG 245509 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | ||| ||||| || | ||||||||| ||||||||||| || ||||| Sbjct 245510 TCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGCGTCTTCACG 245569 Query 34379 AAGATCTGCAT 34389 || |||||||| Sbjct 245570 AATATCTGCAT 245580 Score = 131 bits (144), Expect = 1e-25 Identities = 175/239 (73%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 34179 GCACCA-GGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 |||||| |||| | ||| || ||||| |||||||||||||||||| || | || Sbjct 245650 GCACCAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTCCGACCATCC 245709 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || || || ||||| |||||||||||| || | || ||||||||| Sbjct 245710 TCAAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 245769 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | |||| || ||||| || | |||||||| Sbjct 245770 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTC 245829 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTCGAATGG--TGCGTGCGC-AGAG 34413 ||||| |||||||| || || ||||||||||| | |||| || ||||||||| |||| Sbjct 245830 TTGCCAGTGAGAGTCTTAACGAAGATCTGCATGG--CGAAGGGGATGCGTGCGCGAGAG 245886 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||||||||| | || || ||||| | || || ||||| |||||||||||||| Sbjct 245071 CCGCCGCGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAG 245130 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || ||| |||| || | ||||||||| ||||| || | |||||||||| || |||| Sbjct 245131 AGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 245190 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||| || ||||| ||| | | | | || | ||| | || ||||| Sbjct 245191 -ATACCCTCCTTATCCTGGATCTTCGCCTTGACGTTGTCGATGGTATCAGAAGACTCGAC 245249 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||| ||||| || | || || || ||||||||||| Sbjct 245250 CTCGAGCGTGATGGTCTTGCCAGTCAACGTCTTGACGAAGATCTGCAT 245297 >seq379 Length=45813 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||| |||||||| ||| ||| | || || | ||||||||| ||||| Sbjct 39396 TCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAG 39455 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||||||| || | || ||||||||| ||||| ||| | || | Sbjct 39456 ATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 39515 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| |||| || ||||| || | |||||||| ||||||||||| || || || Sbjct 39516 TCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 39575 Query 34379 AAGATCTGCAT 34389 || |||||||| Sbjct 39576 AAAATCTGCAT 39586 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || || ||||| ||||||||||| || Sbjct 38519 CCACCGCGGAGACGAAGGACGAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 38578 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 || || |||| || | ||||||||| ||||| || || |||||||||| || |||| Sbjct 38579 AGAGTGCGCCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 38638 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | | |||| || | || || || Sbjct 38639 -ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCAATCGTGTCCGAGGACTCAAC 38697 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||| |||||||| | || ||||| ||||||||||| Sbjct 38698 CTCGAGCGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 38745 Score = 118 bits (130), Expect = 7e-22 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || |||||||| || ||| ||| | || || | ||||||||| ||||| Sbjct 38836 TCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 38895 Query 34259 ATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || ||||||||||| | |||| | || ||||||||| ||||| ||| | | Sbjct 38896 ATCAGGCGCTGCTGGTCAGGCGGG-ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 38954 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | || ||||| |||| |||||| || ||||||||||| || || || Sbjct 38955 GTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCCGGTGAGCGTCTTTAC 39014 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 39015 AAAGATCTGCAT 39026 Score = 82.4 bits (90), Expect = 5e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || ||||| | ||| || ||||| |||||||| || || Sbjct 39028 CCGCCGCGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGAA 39087 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275 || |||| |||| || | ||||||||| ||||| ||||| ||||||||||| Sbjct 39088 AGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTC 39140 >seq220 Length=67240 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || |||||| |||| |||| || | ||||||||| ||||| Sbjct 23371 TCCTTCTGGATGTTGTAATCAGACAGCGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAAG 23430 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||||||| || | | ||||||||| ||||| ||| | || | Sbjct 23431 ATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 23490 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || || || || | |||||||| |||||||| || || ||||| Sbjct 23491 TCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACG 23550 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 23551 AAGATCTGCAT 23561 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| ||||| | || || || ||||| |||||||| || || Sbjct 22481 CCACCACGCAGACGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAG 22540 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 ||| || | || || | ||||||||| ||||| || | |||||||||| || |||| Sbjct 22541 AGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 22600 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | | |||| |||| ||| || || Sbjct 22601 -ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCGGACGACTCCAC 22659 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||| |||||||| | || || || ||||||||||| Sbjct 22660 CTCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 22707 >seq339 Length=34629 Score = 118 bits (130), Expect = 7e-22 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||| ||| ||| |||| || | ||||||||| ||||| Sbjct 18834 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 18775 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||||||| || | | ||||||||| ||||| ||| | || | Sbjct 18774 ATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 18715 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| || | |||||||||||||| || || || || || Sbjct 18714 TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACG 18655 Query 34379 AAGATCTGCATCG 34391 || |||||||||| Sbjct 18654 AAAATCTGCATCG 18642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323067700315520