Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq13 116 3e-21 seq379 114 1e-20 seq220 109 4e-19 seq339 102 6e-17 >seq13 Length=301256 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| | ||| | | || | |||||| || |||||||||||||||||| || Sbjct 244842 GCCACCACGCAAGCGGAGGACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAATCCGA 244901 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || |||| | || || || || || || ||||| |||| ||||| |||||||| || Sbjct 244902 GAGAGTGCGACCATCCTCAAGCTGCTTCCCCGCGAAGATCAGACGCTGCTGGTCGGGCGG 244961 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||||||| ||| || ||| || | | ||||| ||| || Sbjct 244962 GATTCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCAATTGTGTCCGATGACTCGAC 245021 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| ||| ||||||||||| |||| ||||| || |||||||||||| Sbjct 245022 CTCCAAGGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATG 245070 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| |||||||||||||||||||||| || ||| |||| || || || Sbjct 245094 GTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCGTCCTCAAGCTG 245153 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| ||||| ||||| ||||| || || | ||||||||| ||| || || Sbjct 245154 CTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGGATACCCTCCTTATCCTGGATCTT 245213 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | | || | ||| ||||| | || || |||||||| || Sbjct 245214 CGCCTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGCGTGATGGTCTTGCCAGT 245273 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||| ||||| Sbjct 245274 CAACGTCTTGACGAAGATCTGCAT 245297 >seq379 Length=45813 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||||||||||||||||||||||||||| || ||| |||| || || || Sbjct 38542 GTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCCTCAAGCTG 38601 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| ||||| || || | |||||||||||| || || Sbjct 38602 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTT 38661 Query 45253 TTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCG 45311 ||| | || | || | ||||| ||| ||||| | || || |||||||| | Sbjct 38662 CGCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCGG 38720 Query 45312 TCAGAGTCTTCACAAAGATTTGCAT 45336 ||| |||||||| ||||| ||||| Sbjct 38721 TCAAGGTCTTCACGAAGATCTGCAT 38745 Score = 105 bits (116), Expect = 5e-18 Identities = 152/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 45126 ATACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 ||||| || |||||||| ||||||||| || |||||||| || ||| | || Sbjct 38815 ATACCGAGATGCAGCGTAGACTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCC 38874 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || |||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct 38875 TCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 38934 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | | ||||| ||| ||||||| || |||||| Sbjct 38935 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTC 38994 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| || || ||||| |||||||| |||||| Sbjct 38995 TTGCCGGTGAGCGTCTTTACAAAGATCTGCATG 39027 >seq220 Length=67240 Score = 109 bits (120), Expect = 4e-19 Identities = 154/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 45127 TACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGT 45185 ||||||| || || ||| ||||||||| |||||||| || ||| || |||| | Sbjct 23351 TACCAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGCGTACGGCCGTCCT 23410 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 | || || || || ||||| || | ||||| ||||||||||| | ||||||||||||| Sbjct 23411 CGAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCT 23470 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 || || ||| || | | | |||| | ||| ||||| | ||| || |||| Sbjct 23471 GGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCT 23530 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 |||| || || |||||||| ||||| |||||| || Sbjct 23531 TGCCGGTAAGGGTCTTCACGAAGATCTGCATGGTG 23565 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| |||||||||||||| |||||||| || || ||| | || || || || Sbjct 22504 GTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCATCCTCGAGCTG 22563 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| ||||| ||||| ||||| || || | |||||||||||| || || Sbjct 22564 CTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTT 22623 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | |||| ||||||||| | || || |||||||| || Sbjct 22624 CGCCTTCACGTTGTCGATCGTGTCGGACGACTCCACCTCGAGCGTGATGGTCTTGCCGGT 22683 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || ||||| |||||| Sbjct 22684 CAACGTCTTGACGAAGATCTGCATG 22708 >seq339 Length=34629 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| |||| ||| |||| || || || Sbjct 18847 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGCTG 18788 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| || | ||||| |||||||| || | ||||||||||||| || || Sbjct 18787 CTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTT 18728 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| ||| ||||| | ||| || || |||||||| Sbjct 18727 GGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCCGT 18668 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || || || ||||| Sbjct 18667 AAGGGTCTTGACGAAAATCTGCAT 18644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395069942042932