Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq378 113 6e-20 seq97 105 8e-18 >seq378 Length=27749 Score = 113 bits (124), Expect = 6e-20 Identities = 362/558 (65%), Gaps = 8/558 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 ||||| || || ||||| ||||| || | | || | || || ||||| ||||| Sbjct 7371 CATGCAAATTCAGTGTGCATGCCCTCATCCCGGCATATGAGCTCATTCGAAAATGTGAGG 7312 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||||||||| | ||| || ||||| ||||| | ||||| ||||| |||||||| Sbjct 7311 CCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCGAAGGATCCTGAAAAGAAT 7252 Query 33702 ATTCCTTCTACTGCAGC-AAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATG 33757 || || || ||||| || |||| || ||| || | | | | || || |||| Sbjct 7251 ATACCCTCCACTGCCGCGAAAGCCACTAA-TCGCACGGCGAATGAGGACCTCTCGTCAGC 7193 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||||||| | ||||| || |||||| || ||||| || | || Sbjct 7192 GATCCACTTTAGCGCCCACTCTCCCTTCTCCGAAACGGTCGGCATGGTGGTCAGAGCTGC 7133 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 ||| || | | | ||| ||||| | || || | |||||| || ||| | Sbjct 7132 AAATAGTTTGGTGCGTTCGCGTGGATCTTGGATGTACGTCTGGATCAAGAGGGAGTACGT 7073 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 || ||||||| ||| || || ||||| || || |||||||| | || || | || Sbjct 7072 CTCTGAATGAACGTTCTCCATCATGATCTGGAAACCATAGAAACACCGTGCTTCCGCAAC 7013 Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997 ||||| || | | ||||| ||| | | || || ||||| ||||| || || || Sbjct 7012 TTGCACCTCAGCGCTGAATCGCTCTACGAGGTTCTCGTTCACGATTCCGTCGGATGCGGC 6953 Query 33998 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT---TATTCCA 34054 || || || | || ||| || || |||| | | || |||| | | ||| Sbjct 6952 GAAGAAGGCGAGGACGTGTGAGATGAAGCGCCTTTCTCCGTGGGTGAGTTTCGTGTGCCA 6893 Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114 ||| | |||||| || | ||| | |||||| ||||| || ||||| | |||| Sbjct 6892 GTCAAGTAGATCTTTGGACAGATCTATTTCTTCGGAAGTCCAGAACGATGCTTGCGCCTG 6833 Query 34115 TTTATACATATTCCAGAT 34132 ||||||||| |||| || Sbjct 6832 TTTATACATTCTCCATAT 6815 >seq97 Length=131314 Score = 105 bits (116), Expect = 8e-18 Identities = 158/222 (71%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||| ||||| ||| ||| || |||||||||| | || ||||| || ||||||| Sbjct 124538 ACAAGCGAACTCGGTGTGGAGGCCCTCGTCTCGAGAGATCCTCTCGTTGGAGTACGTGAG 124597 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 || |||| || |||||||| || ||||||||||| || ||||| ||||| || ||||| Sbjct 124598 ACCTGGCAGGAGACCACGCTTCTTGAGCCAAAATATTGACGCGAACGATCCAGAGAAGAA 124657 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--GC-TGTCATG 33757 |||||||| | ||| || || | |||||| || | || || |||||| Sbjct 124658 AATTCCTTCCGCACAAGCGAAAGCGACTAGTCTCATGGCAAAGGATGCCTGCTTGTCATC 124717 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 |||||| || |||||||| |||||| | || || | ||| Sbjct 124718 TATCCATCGATGGGCCCAATCCGCCTTCCTCTTCACGCTAGG 124759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629809002989760