Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq97 114 2e-20 seq378 102 1e-16 >seq97 Length=131314 Score = 114 bits (126), Expect = 2e-20 Identities = 160/223 (72%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 ||| ||||| ||| ||| || |||||||||| | || |||||||| ||||||| Sbjct 124538 ACAAGCGAACTCGGTGTGGAGGCCCTCGTCTCGAGAGATCCTCTCGTTGGAGTACGTGAG 124597 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276 || |||| || |||||||| || ||||||||||| ||||| || |||||||| ||||| Sbjct 124598 ACCTGGCAGGAGACCACGCTTCTTGAGCCAAAATATTGACGCGAACGATCCAGAGAAGAA 124657 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA----ACCGGCACTGTCAT 36332 ||||||||| | || || || | |||||| || | || || |||||| Sbjct 124658 AATTCCTTCCGCACAAGCGAAAGCGACTAGTCTCATGGCAAAGGATGCCTGC-TTGTCAT 124716 Query 36333 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 36375 |||||| || |||||||| |||||| | || || | ||| Sbjct 124717 CTATCCATCGATGGGCCCAATCCGCCTTCCTCTTCACGCTAGG 124759 >seq378 Length=27749 Score = 102 bits (112), Expect = 1e-16 Identities = 337/518 (65%), Gaps = 12/518 (2%) Strand=Plus/Minus Query 36200 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 36259 || || ||||| ||||| |||||||||||||| | ||| || ||||| ||||| | || Sbjct 7329 TCATTCGAAAATGTGAGGCCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCG 7270 Query 36260 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGC-AAAGGCAATAAGTCTCTCTCCATA 36318 || ||||| |||||||| || || || |||||||| |||| || ||| || | | | | Sbjct 7269 AAGGATCCTGAAAAGAATATACCCTCCACTGCCGCGAAAGCCACTAA-TCGCACGGCGAA 7211 Query 36319 ACCGGCACT---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 36375 || || |||| ||||||||| | ||||| || |||||| || || Sbjct 7210 TGAGGACCTCTCGTCAGCGATCCACTTTAGCGCCCACTCTCCCTTCTCCGAAACGGTCGG 7151 Query 36376 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 36435 ||| || | ||| ||| || | | | ||| ||||| | || || | Sbjct 7150 CATGGTGGTCAGAGCTGCAAATAGTTTGGTGCGTTCGCGTGGATCTTGGATGTACGTCTG 7091 Query 36436 AATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 36495 ||||| || ||| | || ||||||| ||| || || || || || || ||||| Sbjct 7090 GATCAAGAGGGAGTACGTCTCTGAATGAACGTTCTCCATCATGATCTGGAAACCATAGAA 7031 Query 36496 ACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 36555 ||| | || || | || || || || | | ||||| ||| | | || || ||||| Sbjct 7030 ACACCGTGCTTCCGCAACTTGCACCTCAGCGCTGAATCGCTCTACGAGGTTCTCGTTCAC 6971 Query 36556 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA--ATATTTTTCGTTT 36613 |||||||| || || || || || | || ||| || || ||| || | Sbjct 6970 GATTCCGTCGGATGCGGCGAAGAAGGCGAGGACGTGTGAGATGAAGCGCCTTTCTCCGTG 6911 Query 36614 GGTGTTAGTT---TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 36670 |||| |||| | | ||| ||| | |||||| || | ||| | |||||| ||| Sbjct 6910 GGTG--AGTTTCGTGTGCCAGTCAAGTAGATCTTTGGACAGATCTATTTCTTCGGAAGTC 6853 Query 36671 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 36708 || || ||||| | |||| ||||||||| |||| || Sbjct 6852 CAGAACGATGCTTGCGCCTGTTTATACATTCTCCATAT 6815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658163815941280