Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq117 102 6e-17 seq18 87.8 1e-12 >seq117 Length=117856 Score = 102 bits (112), Expect = 6e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| || | || || || || || | || || || || || || || || ||||||| Sbjct 88389 TGGCATTCTCAGCGGTGGAGGGTATCTTTTTCTCGGGCTCTTTCGCCGCAATCTTCTGGC 88448 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 |||||||||| ||||||||| ||| | |||||||||||||| | || |||| |||| Sbjct 88449 TGAAGAAACGAGGGCTCATGCCTGGGCTTTCGTTTTCCAACGAGCTCATATGCCGCGACG 88508 Query 22868 AAGGTCTACACTGTGACTTTGCTTGT 22893 |||| |||||| ||||| |||||| Sbjct 88509 AAGGCCTACACACCGACTTCGCTTGT 88534 >seq18 Length=286962 Score = 87.8 bits (96), Expect = 1e-12 Identities = 115/154 (75%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCATCGT-TCACGGCCCAGAAGGGCACGTGCGG 33623 |||||||| ||| ||| |||||||| || || |||||| | ||||||| ||| ||| Sbjct 185215 CGCATACCGCAGACGGGAGACAAGTTCGCCTCACGTCACGGAC-AGAAGGGTACGATCGG 185157 Query 33624 CATGATGTA-CGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAG 33682 || | || || | || || |||||||||||||| |||| || | || |||||| | Sbjct 185156 TATCACCTATCGGCAAGAGG-ACATGCCGTTCACGTCCGAGGGTATCGTGCCGGACATCA 185098 Query 33683 TCATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 |||||||||| || || | || ||||| ||||| Sbjct 185097 TCATCAACCCTCACGCCATTCCGTCGCGTATGAC 185064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356228858976076