Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq378 120 4e-22 seq117 120 4e-22 seq202 111 2e-19 seq97 111 2e-19 >seq378 Length=27749 Score = 120 bits (132), Expect = 4e-22 Identities = 364/559 (65%), Gaps = 10/559 (2%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 ||||| || || ||||| ||||| || | | || || || || ||||| ||||| Sbjct 7371 CATGCAAATTCAGTGTGCATGCCCTCATCCCGGCATATGAGCTCATTCGAAAATGTGAGG 7312 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||||||||| | ||| || ||||| ||||| | || || || || |||||||| Sbjct 7311 CCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCGAAGGATCCTGAAAAGAAT 7252 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT---GTCATGT 50136 || || || ||||| || || || || | || | | | | || || |||| Sbjct 7251 ATACCCTCCACTGCCGCGAAAGCCACTAATCGCACGGCGAATGAGGACCTCTCGTCAGCG 7192 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||||||| | ||||| || |||||| || ||||| || | || | Sbjct 7191 ATCCACTTTAGCGCCCACTCTCCCTTCTCCGAAACGGTCGGCATGGTGGTCAGAGCTGCA 7132 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 || || | | | ||| ||||| | || || | |||||| || ||| | Sbjct 7131 AATAGTTTGGTGCGTTCGCGTGGATCTTGGATGTACGTCTGGATCAAGAGGGAGTACGTC 7072 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || ||||||| ||| || || ||||| || || |||||||| | || || | || Sbjct 7071 TCTGAATGAACGTTCTCCATCATGATCTGGAAACCATAGAAACACCGTGCTTCCGCAACT 7012 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 ||||| || | | ||||| || | | || || ||||| |||||||| || || Sbjct 7011 TGCACCTCAGCGCTGAATCGCTCTACGAGGTTCTCGTTCACGATTCCGTCGGATGCGGCG 6952 Query 50377 AAAAACGCCAATACATGTTTTATAAAATG--TTTTTCGTTGGGTGTTAGTT---TATTCC 50431 || || || | || ||| || || | ||| || |||||| |||| | | || Sbjct 6951 AAGAAGGCGAGGACGTGTGAGATGAAGCGCCTTTCTCCGTGGGTG--AGTTTCGTGTGCC 6894 Query 50432 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491 | ||| | |||||| || | ||||| |||||| ||||| || ||||| | |||| Sbjct 6893 AGTCAAGTAGATCTTTGGACAGATCTATTTCTTCGGAAGTCCAGAACGATGCTTGCGCCT 6834 Query 50492 TTTTATACATATTCCAGAT 50510 ||||||||| |||| || Sbjct 6833 GTTTATACATTCTCCATAT 6815 >seq117 Length=117856 Score = 120 bits (132), Expect = 4e-22 Identities = 370/569 (65%), Gaps = 10/569 (2%) Strand=Plus/Minus Query 49950 AAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||| || | ||| ||||| ||| ||| || || ||||| | | || || |||||||| Sbjct 88543 AAAGATGAGACAAGCGAAGTCGGTGTGTAGGCCTTCGTCGCGGCATATGAGCTCGTTGGA 88484 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 ||||| || || ||||| || || || || || ||||| || || | || || || || Sbjct 88483 AAACGAAAGCCCAGGCATGAGCCCTCGTTTCTTCAGCCAGAAGATTGCGGCGAAAGAGCC 88424 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT 50129 || || ||||| || || || || | || || || || || | | || |||||| Sbjct 88423 CGAGAAAAAGATACCCTCCACCGCTGAGAATGCCACCAGCCT-GATAGAGAA-TGGCGCG 88366 Query 50130 GTCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 50184 || || ||||| | ||||||| || ||||| | | || || || | ||| Sbjct 88365 CTCCGGTCCCCGATCCAACGTAGAGCCCATTCCGCCTTTCTCTGAACGCAGGGAACCGTC 88306 Query 50185 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 50244 || ||||| || ||||||| ||| | || | ||| || | ||||| |||| Sbjct 88305 TCGATGGCGTTGAAGAGATGATTTCTCTCGATGGGATCGCCGACGAAGGTATCAATCAGG 88246 Query 50245 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 50304 || || | ||||| |||||||| || ||||| || || || |||||||| || | Sbjct 88245 AGGGAGTAAGTCTCCGAGTGAATGTTCTCCATGGCAATTTGGAAGCCGTAGAAGCAGCGC 88186 Query 50305 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCG 50364 ||||||| | ||| ||||| | ||| || ||| | | || || ||||| || || Sbjct 88185 GCCTCGGCGACCTGAACTTCGGCCGCAAAGCGCTCAACGAGGTTCTCGTTCACAATACCA 88126 Query 50365 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT 50424 || ||| || || || || | | ||| || || || |||| | || ||| Sbjct 88125 TCCGAGGCGGCGAAGAATGCGAGGATATGGGAGATGAAGTGACGCTCGTCCGAGGTGAGT 88066 Query 50425 ---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 50481 | |||||||| | ||| || || | | ||| | ||||| | ||||| || Sbjct 88065 GTATGATTCCAATGAGAGATGTCCTTTGCCAGATCGATCTCTTCAGCCGTCCAGAAGCTA 88006 Query 50482 GCCTCTGCCTTTTTATACATATTCCAGAT 50510 ||||| || ||| ||||| | ||| || Sbjct 88005 GCCTCCGCGCGTTTGTACATTTCCCATAT 87977 >seq202 Length=72248 Score = 111 bits (122), Expect = 2e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| || ||||| || ||||||| || ||| ||||||||||| || ||||| Sbjct 46225 CACGCGAACTCAGTGTGCATTCCTTCGTCTCGACAAATGAGTTCGTTGGAGAAAGTGAGG 46166 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || || | ||||| ||||| || || | || || || || || || ||| Sbjct 46165 CCGGGCATGAGACCCCTTTTTTTGAGCCAGAAGATTGCTGCGAACGAGCCCGAGAAAAAG 46106 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTC 50110 ||||| || ||||||||||| || || |||| Sbjct 46105 ATTCCCTCCACTGCGGCAAACGCTACGAGTC 46075 >seq97 Length=131314 Score = 111 bits (122), Expect = 2e-19 Identities = 159/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| ||||| ||| ||| || |||||||||| | || |||||||| ||||||| Sbjct 124538 ACAAGCGAACTCGGTGTGGAGGCCCTCGTCTCGAGAGATCCTCTCGTTGGAGTACGTGAG 124597 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || |||| || |||||||| || ||||||||||| ||||| || || ||||| ||||| Sbjct 124598 ACCTGGCAGGAGACCACGCTTCTTGAGCCAAAATATTGACGCGAACGATCCAGAGAAGAA 124657 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC--GC-TGTCATG 50135 |||||||| | || || || || |||||| || | || || |||||| Sbjct 124658 AATTCCTTCCGCACAAGCGAAAGCGACTAGTCTCATGGCAAAGGATGCCTGCTTGTCATC 124717 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177 |||||| || |||||||| |||||| | || || | ||| Sbjct 124718 TATCCATCGATGGGCCCAATCCGCCTTCCTCTTCACGCTAGG 124759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718258995630880