Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq378 138 2e-27 seq97 105 9e-18 >seq378 Length=27749 Score = 138 bits (152), Expect = 2e-27 Identities = 370/559 (66%), Gaps = 10/559 (2%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 ||||| || || ||||| |||||||| | | || | || || ||||| ||||| Sbjct 7371 CATGCAAATTCAGTGTGCATGCCCTCATCCCGGCATATGAGCTCATTCGAAAATGTGAGG 7312 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||||||||| | ||| || ||||| ||||||| || || ||||| |||||||| Sbjct 7311 CCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCGAAGGATCCTGAAAAGAAT 7252 Query 42185 ATTCCTTCTACTGCCGC-AAAGGCAATAAGTCTCTCTCCATAACCGGCACT---GTCATG 42240 || || || |||||||| |||| || ||| || | | | | || || |||| Sbjct 7251 ATACCCTCCACTGCCGCGAAAGCCACTAA-TCGCACGGCGAATGAGGACCTCTCGTCAGC 7193 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||||||| | ||||| || |||||| || ||||| || | || Sbjct 7192 GATCCACTTTAGCGCCCACTCTCCCTTCTCCGAAACGGTCGGCATGGTGGTCAGAGCTGC 7133 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 ||| || | | | ||| ||||| | || || | |||||| || ||| | Sbjct 7132 AAATAGTTTGGTGCGTTCGCGTGGATCTTGGATGTACGTCTGGATCAAGAGGGAGTACGT 7073 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 |||||||||| ||| || || ||||| || || |||||||| | || || | ||| Sbjct 7072 CTCTGAATGAACGTTCTCCATCATGATCTGGAAACCATAGAAACACCGTGCTTCCGCAAC 7013 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480 || || || | | ||||| || | | || |||||||| |||||||| || || Sbjct 7012 TTGCACCTCAGCGCTGAATCGCTCTACGAGGTTCTCGTTCACGATTCCGTCGGATGCGGC 6953 Query 42481 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCG-GTGTTAATT---TATTCC 42536 || || || | || ||| || || |||| |||| | || | || | | || Sbjct 6952 GAAGAAGGCGAGGACGTGTGAGATGAAGCGCCTTTC-TCCGTGGGTGAGTTTCGTGTGCC 6894 Query 42537 AATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596 | ||| | |||||| || | ||||| |||||| ||||| || ||||||| |||| Sbjct 6893 AGTCAAGTAGATCTTTGGACAGATCTATTTCTTCGGAAGTCCAGAACGATGCTTGCGCCT 6834 Query 42597 TTTTATACATATTCCAGAT 42615 ||||||||| |||| || Sbjct 6833 GTTTATACATTCTCCATAT 6815 >seq97 Length=131314 Score = 105 bits (116), Expect = 9e-18 Identities = 158/223 (71%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| ||||| ||| ||| || ||||| |||| | || |||||||| ||||||| Sbjct 124538 ACAAGCGAACTCGGTGTGGAGGCCCTCGTCTCGAGAGATCCTCTCGTTGGAGTACGTGAG 124597 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || |||| || |||||||| || ||||||||||| ||||| || |||||||| ||||| Sbjct 124598 ACCTGGCAGGAGACCACGCTTCTTGAGCCAAAATATTGACGCGAACGATCCAGAGAAGAA 124657 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA----ACCGGCACTGTCAT 42239 |||||||| | || || || | |||||| || | || || |||||| Sbjct 124658 AATTCCTTCCGCACAAGCGAAAGCGACTAGTCTCATGGCAAAGGATGCCTGC-TTGTCAT 124716 Query 42240 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 42282 |||||| || |||||||| |||||| | || || | ||| Sbjct 124717 CTATCCATCGATGGGCCCAATCCGCCTTCCTCTTCACGCTAGG 124759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671130038949920