Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq117 87.8 2e-12 >seq117 Length=117856 Score = 87.8 bits (96), Expect = 2e-12 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 13132 TAGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAG 13191 ||| |||| ||| || | ||| || || || ||| | ||||| || | | ||| || Sbjct 88552 TAGGTGCTCAAAGATGAGACAAGCGAAGTCGGTGTGTAGGCCTTCGTCGCGGCATATGAG 88493 Query 13192 CTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGC 13251 |||||| ||||| | || || ||||| ||||||||||| || | ||| || || || || Sbjct 88492 CTCGTTGGAAAACGAAAGCCCAGGCATGAGCCCTCGTTTCTTCAGCCAGAAGATTGCGGC 88433 Query 13252 AAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCT 13302 || || ||||| ||||| || || || || |||| || || | || ||| Sbjct 88432 GAAAGAGCCCGAGAAAAAGATACCCTCCACCGCTGAGAATGCCACCAGCCT 88382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430976664162984