Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq13 102 2e-16 seq117 100 7e-16 >seq13 Length=301256 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||||| ||||| || ||||| || || || || || || || | ||||| || || Sbjct 245375 AGATGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTCGAGC 245434 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || ||||| || || || | ||| || || || || || || || || ||||| ||| Sbjct 245435 TGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATC 245494 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || || || ||||| || | || || | || ||||| || || || ||||| || Sbjct 245495 TTCGCCTTCACATTGTCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCG 245554 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || ||||||||||| Sbjct 245555 GTGAGCGTCTTCACGAATATCTGCAT 245580 >seq117 Length=117856 Score = 100 bits (110), Expect = 7e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 269132 AGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATC 269191 ||| | || || || | || || || ||||| || || ||||| ||||| ||||| ||| Sbjct 88382 AGGCTGGTGGCATTCTCAGCGGTGGAGGGTATCTTTTTCTCGGGCTCTTTCGCCGCAATC 88441 Query 269192 TTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGC 269251 || ||| |||||||| |||| || ||||| || | | || || ||||| | ||| || Sbjct 88442 TTCTGGCTGAAGAAACGAGGGCTCATGCCTGGGCTTTCGTTTTCCAACGAGCTCATATGC 88501 Query 269252 AGGGACGAAGGTTTACACTGCGACTTCGCTTGT 269284 | |||||||| ||||| ||||||||||||| Sbjct 88502 CGCGACGAAGGCCTACACACCGACTTCGCTTGT 88534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151382290497136