Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq518 95.1 6e-15 seq229 87.8 9e-13 seq173 87.8 9e-13 seq62 87.8 9e-13 seq15 86.0 3e-12 seq504 84.2 1e-11 seq107 84.2 1e-11 >seq518 Length=10947 Score = 95.1 bits (104), Expect = 6e-15 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| |||||||||||||||||||||||||||| |||| | Sbjct 7335 TGGCCCATGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 7276 Query 11516 TGAGCTAATGGGCCGTCGA 11534 |||||||| ||||| ||| Sbjct 7275 TGAGCTAACAGGCCGACGA 7257 >seq229 Length=64414 Score = 87.8 bits (96), Expect = 9e-13 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || |||||||||| |||||||||||||||||||||||||||| |||| | Sbjct 28904 TGGCCCGTGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 28963 Query 11516 TGAGCTAATGGGCCG 11530 |||||||| ||||| Sbjct 28964 TGAGCTAACAGGCCG 28978 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||||||||||||| || Sbjct 31381 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 31440 Query 11528 CC 11529 || Sbjct 31441 CC 31442 >seq173 Length=91693 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| |||||||||||||| || Sbjct 39218 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 39277 Query 11528 CC 11529 || Sbjct 39278 CC 39279 >seq62 Length=175978 Score = 87.8 bits (96), Expect = 9e-13 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || |||||||||| |||||||||||||||||||||||||||| |||| | Sbjct 89844 TGGCCCGTGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 89903 Query 11516 TGAGCTAATGGGCCGTCGACGATTGTGATT 11545 |||||||| |||| | || | | ||||| Sbjct 89904 TGAGCTAACAGGCCATAAACAACTTTGATT 89933 Score = 86.0 bits (94), Expect = 3e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||| || |||||||||| |||||||||||||||||||||||||||| |||| | Sbjct 131284 TGGCCCGTGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 131343 Query 11516 TGAGCTAATGGGCC 11529 |||||||| |||| Sbjct 131344 TGAGCTAACAGGCC 131357 >seq15 Length=293688 Score = 86.0 bits (94), Expect = 3e-12 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11448 AATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCT 11506 |||||| ||||||| | |||||||||| |||||||||||||||||||||||||| Sbjct 108839 AATCAATATTGGCCATCGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCT 108780 Query 11507 CTRACCAACTGAGCTA 11522 || ||||||||||||| Sbjct 108779 CTAACCAACTGAGCTA 108764 >seq504 Length=12151 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 8966 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 8912 >seq107 Length=122946 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTA 11522 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 17137 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTA 17083 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261487719878992