Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq13 111 1e-19 seq339 95.1 1e-14 seq220 95.1 1e-14 seq379 87.8 2e-12 >seq13 Length=301256 Score = 111 bits (122), Expect = 1e-19 Identities = 155/214 (72%), Gaps = 5/214 (2%) Strand=Plus/Plus Query 94798 CACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATC 94854 ||||||| || | ||||| ||||| || | ||| || ||| || | || || ||| Sbjct 245651 CACCAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACA--GCGTCCGACCATC 245708 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 ||| ||||| || || ||||||| | | ||||| || |||||||| || || ||||| Sbjct 245709 CTCAAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTC 245768 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | || || ||||||||| | ||| ||||| | | ||||| || | |||||||| Sbjct 245769 CTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGT 245828 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || ||||| ||||| || || |||||||||||| Sbjct 245829 CTTGCCAGTGAGAGTCTTAACGAAGATCTGCATG 245862 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| | ||||| || | ||||| || || || ||||| || || Sbjct 245143 TCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGGATACCCTCCTTA 245202 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| | ||| || |||| ||||| || | ||||||| Sbjct 245203 TCCTGGATCTTCGCCTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGCGTGATG 245262 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| | || || || ||||||||||| Sbjct 245263 GTCTTGCCAGTCAACGTCTTGACGAAGATCTGCAT 245297 >seq339 Length=34629 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| || ||||||| ||| | ||||| ||||| || || Sbjct 18840 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 18781 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | ||||| || || || ||||| || ||||| | || || |||||| Sbjct 18780 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTGGCCTTG 18721 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | ||| ||||| | | ||||| || | ||||||||||| || ||||| || Sbjct 18720 ACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTC 18661 Query 94991 TTCACAAAGATCTGCAT 95007 || || || |||||||| Sbjct 18660 TTGACGAAAATCTGCAT 18644 >seq220 Length=67240 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/221 (71%), Gaps = 7/221 (3%) Strand=Plus/Plus Query 94793 CGCAAC--ACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTG 94849 |||||| |||||| || | || || ||||| || | ||| ||||| || || | Sbjct 23344 CGCAACGTACCAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGCGTACGG 23403 Query 94850 GAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 ||||| ||||| || || | ||||| | | ||||| || ||||||||||| || Sbjct 23404 CCGTCCTCGAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCC 23463 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCG 94967 ||||| | || || |||||||| | ||| ||||| || ||| || || || | | Sbjct 23464 TTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTC-GC-TGGACTCAACCTCGAGGG 23521 Query 94968 TGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||||||| || || ||||| || ||||| |||||||||||| Sbjct 23522 TGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCATG 23562 >seq379 Length=45813 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || ||| | ||||| | | ||||| || || || || || || || Sbjct 38871 ATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTT 38930 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || ||||| ||| | ||| ||||| | | ||||| || | |||||| Sbjct 38931 GTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGAT 38990 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || || || |||||||||||||||| Sbjct 38991 CGTCTTGCCGGTGAGCGTCTTTACAAAGATCTGCATGC 39028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285080825120