Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq471 131 3e-26 seq172 105 1e-18 >seq471 Length=52329 Score = 131 bits (144), Expect = 3e-26 Identities = 123/154 (80%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| ||| || || |||||||| || ||||||||||| || | Sbjct 33433 CGCCAAGCGTCACCGCAAGAT-TCTCCGCGACAACATCCAGGGCATCACCAAGCCCGCCA 33375 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||||||||||| || || |||||| ||||||| | |||| || |||| Sbjct 33374 TCCGCCGTCTCGCTCGTCGTGGCGGTGTGAAGCGTATCTCTGGCCTCATCTACGAGGAGA 33315 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 |||| ||| ||||||||||| || ||| ||| Sbjct 33314 CCCGTGGTGTATTGAAGATCTTTCTTGAGAACGT 33281 Score = 113 bits (124), Expect = 7e-21 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| || ||||||||||| || ||||| ||||| ||||||||||| || || Sbjct 52329 GACAACATCCAGGGCATCACCAAGCCCGCCATCCGCCGTCTCGCTCGTCGTGGCGGTGTG 52270 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| ||||||| | |||| || |||| || | ||| |||||||||||||| || Sbjct 52269 AAGCGTATCTCTGGCCTCATCTACGAGGAGACCCGCGGTGTATTGAAGATCTTCCTTGAG 52210 Query 16580 ACCGT 16584 | ||| Sbjct 52209 AACGT 52205 >seq172 Length=92057 Score = 105 bits (116), Expect = 1e-18 Identities = 97/120 (81%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| ||| || || |||||||| || ||||||||||| || | Sbjct 91935 CGCCAAGCGTCACCGCAAGAT-TCTCCGCGACAACATCCAGGGCATCACCAAGCCCGCCA 91993 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||||||||||| || || |||||| ||||||| | |||| || |||| Sbjct 91994 TCCGCCGTCTCGCTCGTCGTGGCGGTGTGAAGCGTATCTCTGGCCTCATCTACGAGGAGA 92053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074201576756