Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq378 116 5e-21 seq97 114 2e-20 seq202 105 8e-18 seq247 84.2 3e-11 >seq378 Length=27749 Score = 116 bits (128), Expect = 5e-21 Identities = 363/558 (65%), Gaps = 8/558 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 ||||| || || ||||| ||||| || | | || || || || ||||| ||||| Sbjct 7371 CATGCAAATTCAGTGTGCATGCCCTCATCCCGGCATATGAGCTCATTCGAAAATGTGAGG 7312 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||||||||| | ||| || ||||| ||||| | ||||| ||||| |||||||| Sbjct 7311 CCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCGAAGGATCCTGAAAAGAAT 7252 Query 33424 ATTCCTTCTACTGCAGC-AAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATG 33479 || || || ||||| || |||| || ||| || | | | | || || |||| Sbjct 7251 ATACCCTCCACTGCCGCGAAAGCCACTAA-TCGCACGGCGAATGAGGACCTCTCGTCAGC 7193 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||||||| | ||||| || |||||| || ||||| || | || Sbjct 7192 GATCCACTTTAGCGCCCACTCTCCCTTCTCCGAAACGGTCGGCATGGTGGTCAGAGCTGC 7133 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 ||| || | | | ||| ||||| | || || | |||||| || ||| | Sbjct 7132 AAATAGTTTGGTGCGTTCGCGTGGATCTTGGATGTACGTCTGGATCAAGAGGGAGTACGT 7073 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 || ||||||| ||| || || ||||| || || |||||||| | || || | || Sbjct 7072 CTCTGAATGAACGTTCTCCATCATGATCTGGAAACCATAGAAACACCGTGCTTCCGCAAC 7013 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 || || || | | ||||| || | | || || ||||| |||||||| || || Sbjct 7012 TTGCACCTCAGCGCTGAATCGCTCTACGAGGTTCTCGTTCACGATTCCGTCGGATGCGGC 6953 Query 33720 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT---TATTCCA 33776 || || || | || ||| || || |||| | | || |||| | | ||| Sbjct 6952 GAAGAAGGCGAGGACGTGTGAGATGAAGCGCCTTTCTCCGTGGGTGAGTTTCGTGTGCCA 6893 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 ||| | |||||| || | ||||| |||||| ||||| || ||||| | |||| Sbjct 6892 GTCAAGTAGATCTTTGGACAGATCTATTTCTTCGGAAGTCCAGAACGATGCTTGCGCCTG 6833 Query 33837 TTTATACATGTTCCAGAT 33854 ||||||||| |||| || Sbjct 6832 TTTATACATTCTCCATAT 6815 >seq97 Length=131314 Score = 114 bits (126), Expect = 2e-20 Identities = 160/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| ||||| ||| ||| || |||||||||| | || |||||||| ||||||| Sbjct 124538 ACAAGCGAACTCGGTGTGGAGGCCCTCGTCTCGAGAGATCCTCTCGTTGGAGTACGTGAG 124597 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || |||| || |||||||| || ||||||||||| || ||||| |||||||| ||||| Sbjct 124598 ACCTGGCAGGAGACCACGCTTCTTGAGCCAAAATATTGACGCGAACGATCCAGAGAAGAA 124657 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--GC-TGTCATG 33479 |||||||| | ||| || || | |||||| || | || || |||||| Sbjct 124658 AATTCCTTCCGCACAAGCGAAAGCGACTAGTCTCATGGCAAAGGATGCCTGCTTGTCATC 124717 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33521 |||||| || |||||||| |||||| | || || | ||| Sbjct 124718 TATCCATCGATGGGCCCAATCCGCCTTCCTCTTCACGCTAGG 124759 >seq202 Length=72248 Score = 105 bits (116), Expect = 8e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| || ||||| || ||||||| || ||| ||||||||||| || ||||| Sbjct 46225 CACGCGAACTCAGTGTGCATTCCTTCGTCTCGACAAATGAGTTCGTTGGAGAAAGTGAGG 46166 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || || | ||||| ||||| || || | ||||| || || || || ||| Sbjct 46165 CCGGGCATGAGACCCCTTTTTTTGAGCCAGAAGATTGCTGCGAACGAGCCCGAGAAAAAG 46106 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTC 33454 ||||| || ||||| ||||| || | |||| Sbjct 46105 ATTCCCTCCACTGCGGCAAACGCTACGAGTC 46075 >seq247 Length=55536 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 ||||||||||| |||| ||||| || | || |||||||| ||||| || ||| Sbjct 43910 CATGCGAAATCCGTATGCAAGCCCTCATCGCGGGATATGAGTTCGTTCGAAAAGGTCAGT 43851 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 ||||| | || || | || || ||||| ||||| || ||||||| || || |||||| Sbjct 43850 CCGGGAAGGAGACCTCTTTTCTTGAGCCAGAATATCGAGGCGAATGCGCCCGAGAAGAAG 43791 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTC 33454 || || || || ||| || |||| ||||| Sbjct 43790 ATACCCTCCACACAAGCGAACGCAACAAGTC 43760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622938696770720