Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq220 84.2 1e-11 seq379 82.4 5e-11 >seq220 Length=67240 Score = 84.2 bits (92), Expect = 1e-11 Identities = 155/225 (69%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 38103 CGCAAC--ACCAAA-TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGT 38159 |||||| ||||| ||||| ||| |||||| || || ||||||||||||| ||| Sbjct 23344 CGCAACGTACCAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGACAGCGTACGG 23403 Query 38160 TCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCT 38219 |||| || | || || || || || || ||||| || || |||| || | || || Sbjct 23404 CCGTCCTCGAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATACCCTCC 23463 Query 38220 TTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTA 38279 |||||| || || ||| ||||| | || || || | ||||| || | || Sbjct 23464 TTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTG 23523 Query 38280 ATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTAC 38324 || || || || || | ||| |||||||| ||||||||| | ||| Sbjct 23524 ATGGTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCATGGTGTAC 23568 >seq379 Length=45813 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 || || ||||||||||| ||||| ||||| ||||| | | || |||| || | || Sbjct 38543 TGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCCTCAAGCTGC 38602 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || ||||| || || ||||| || || || | |||| ||| || |||||| || || Sbjct 38603 TTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTC 38662 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||| || || | | || || ||||| || | || || || || || ||| Sbjct 38663 GCCTTGACGTTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCGGTC 38722 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 ||||| |||||||| |||||||| Sbjct 38723 AAGGTCTTCACGAAGATCTGCAT 38745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334942742271452