Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq97 114 2e-20 seq378 100 4e-16 >seq97 Length=131314 Score = 114 bits (126), Expect = 2e-20 Identities = 160/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| ||||| ||| ||| || |||||||||| | || |||||||| ||||||| Sbjct 124538 ACAAGCGAACTCGGTGTGGAGGCCCTCGTCTCGAGAGATCCTCTCGTTGGAGTACGTGAG 124597 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || |||| || |||||||| || ||||||||||| ||||| || |||||||| ||||| Sbjct 124598 ACCTGGCAGGAGACCACGCTTCTTGAGCCAAAATATTGACGCGAACGATCCAGAGAAGAA 124657 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--GC-TGTCATG 32836 ||||||||| | || || || | |||||| || | || || |||||| Sbjct 124658 AATTCCTTCCGCACAAGCGAAAGCGACTAGTCTCATGGCAAAGGATGCCTGCTTGTCATC 124717 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 32878 |||||| || |||||||| |||||| | || || | ||| Sbjct 124718 TATCCATCGATGGGCCCAATCCGCCTTCCTCTTCACGCTAGG 124759 >seq378 Length=27749 Score = 100 bits (110), Expect = 4e-16 Identities = 334/516 (65%), Gaps = 8/516 (2%) Strand=Plus/Minus Query 32703 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 32762 || || ||||| ||||| |||||||||||||| | ||| || ||||| ||||| | || Sbjct 7329 TCATTCGAAAATGTGAGGCCGGGCATTAGGCCCCTCTTCTTGAGCCAGAATATAGCTGCG 7270 Query 32763 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGC-AAAGGCAATAAGTCTCTCTCCATA 32821 || ||||| |||||||| || || || |||||||| |||| || ||| || | | | | Sbjct 7269 AAGGATCCTGAAAAGAATATACCCTCCACTGCCGCGAAAGCCACTAA-TCGCACGGCGAA 7211 Query 32822 ACCGGCGCT---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 32878 || || |||| ||||||||| | ||||| || |||||| || || Sbjct 7210 TGAGGACCTCTCGTCAGCGATCCACTTTAGCGCCCACTCTCCCTTCTCCGAAACGGTCGG 7151 Query 32879 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 32938 ||| || | ||| ||| || | | | ||| ||||| | || || | Sbjct 7150 CATGGTGGTCAGAGCTGCAAATAGTTTGGTGCGTTCGCGTGGATCTTGGATGTACGTCTG 7091 Query 32939 AATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 32998 ||||| || ||| | || ||||||| ||| || || || || || || ||||| Sbjct 7090 GATCAAGAGGGAGTACGTCTCTGAATGAACGTTCTCCATCATGATCTGGAAACCATAGAA 7031 Query 32999 GCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 33058 || | || || | || || || || | | ||||| ||| | | || || ||||| Sbjct 7030 ACACCGTGCTTCCGCAACTTGCACCTCAGCGCTGAATCGCTCTACGAGGTTCTCGTTCAC 6971 Query 33059 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGG 33118 |||||||| || || || || || | || ||| || || |||| | | Sbjct 6970 GATTCCGTCGGATGCGGCGAAGAAGGCGAGGACGTGTGAGATGAAGCGCCTTTCTCCGTG 6911 Query 33119 TGTTAGTT---TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCA 33175 || |||| | | ||| ||| | |||||| || | ||| | |||||| ||||| Sbjct 6910 GGTGAGTTTCGTGTGCCAGTCAAGTAGATCTTTGGACAGATCTATTTCTTCGGAAGTCCA 6851 Query 33176 AAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 33211 || ||||| | |||| ||||||||| |||| || Sbjct 6850 GAACGATGCTTGCGCCTGTTTATACATTCTCCATAT 6815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633623350923200