Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 seq220 104 2e-17 seq379 98.7 9e-16 >seq13 Length=301256 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| ||||| || ||||| | ||||| || ||||||| |||| || ||||||||| Sbjct 245580 ATGCAGATATTCGTGAAGACGCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCT 245521 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| ||||| || ||| ||||| || || ||||| || ||||| Sbjct 245520 GACACTATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 245461 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || ||||| || | || || | || || | ||||||||| Sbjct 245460 CAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCCGATTACAAC 245401 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || || || || || || |||||| Sbjct 245400 ATCCAGAAGGAGTCTACCCTACAT 245377 >seq220 Length=67240 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || ||||||| |||| ||||||||||| Sbjct 22707 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACGCTCGAGGTGGAGTCGTCC 22648 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || || || ||||| Sbjct 22647 GACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 22588 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || |||| ||||| | |||||||| Sbjct 22587 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACGCTCTCGGATTACAAC 22528 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||| || || | ||||| Sbjct 22527 ATCCAGAAGGAGAGCACCCTGCACCTCGTGCT 22496 >seq379 Length=45813 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | ||||| || | ||||| | || || ||||| || Sbjct 39026 ATGCAGATCTTTGTAAAGACGCTCACCGGCAAGACGATCACGTTGGAGGTCGAGTCCTCG 38967 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || || |||||||| Sbjct 38966 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 38907 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || |||| ||||| | || |||||| Sbjct 38906 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTCTCGGACTACAAT 38847 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || || || || || ||||| ||| Sbjct 38846 ATCCAGAAGGAGTCTACGCTGCAT 38823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433322232945980