Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq86 167 3e-36 seq117 152 6e-32 >seq86 Length=145559 Score = 167 bits (184), Expect = 3e-36 Identities = 309/450 (69%), Gaps = 10/450 (2%) Strand=Plus/Minus Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143 ||| ||| || || ||||||||||| | |||||||| || || || | ||||| || Sbjct 4148 ACAGTAAACAGGCGAAGTCGGTATGCATGCCTTCGTCGCGAGAAATGAGTTCATTTGAGA 4089 Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203 | || | || || | || || ||||||||||||||||| || || || || || | Sbjct 4088 AAGTAAGGCCGGGCATCAAGCCGCGTTTCTTGAGCCAAAAGATGGACGCGAACGAGCCGG 4029 Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263 | || || || ||||| || || ||||| || || | ||||| || || | | || Sbjct 4028 AGAAGAAGATGCCTTCGACAGCAGCAAAAGCGACTAGGCGTTCAGCGAACGTCG----AT 3973 Query 93264 TACT----GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319 | || | ||||| | ||||| || ||||| ||||| | ||| || | || Sbjct 3972 TCCTTGTCGGATATCCAGCGCAGTGCCCAGTCCGCTTTCTTCTTCACACATGGGATCGTG 3913 Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 || || |||| || ||||| || || | | | || ||||| || ||||| | | Sbjct 3912 TCTATCGCGTCGAACAGGTACTCGCGTTGAGCAGCGTCCTTGATGTACGTGTCGATGAGC 3853 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 || ||||| | || ||||| | ||||||||| ||| ||||| ||||||||| | | Sbjct 3852 AGGGAATAAGTCTCCGAATGTATATTCTCCATCATAATCTGGAAGCCGTAGAAAGAGCGC 3793 Query 93440 GCTTC-CGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 ||||| ||| | || ||||| | || || | ||||||||| || |||||||| || || Sbjct 3792 GCTTCAGGTGCT-TGAACTTCGTTTGAGAAGCGCTCTACGAGGTTCTCATTGACGATGCC 3734 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATG 93528 || || ||||| || || ||||| | ||| Sbjct 3733 GTCCGAAGCTGCGAAGAAGGCCAACACATG 3704 Score = 143 bits (158), Expect = 3e-29 Identities = 369/561 (66%), Gaps = 11/561 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || || |||||||| || | ||| ||||| || || || | ||| ||| ||| || | Sbjct 2051 CATGCGAAGTCGGTGTGCATACCCTCGTCGCGAGAGATAAGCTCGTTGGAGAAGGTGAGG 2110 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | | || || ||||| | ||| || || || || || ||||| || || Sbjct 2111 CCAGGCATTAAACCACGCTTCTTCAACCAGAAGATGGACGCGAACGAGCCAGAGAAGAAG 2170 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT- 93270 ||||| || || || || || || |||| || ||| | || | | ||| || | Sbjct 2171 ATACCCTCGACCGCAGCGAAGGCGACAAGGCGCTCGCCGAATGTCG----ATTCCTCGTC 2226 Query 93271 ---GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 |||||| | ||||| || || || ||||| ||||| || | || |||||||| Sbjct 2227 TGTGATCCAGCGCAGGGCCCAGTCCGCCTTCTTCTTGATACAGGGGATGGTCTCGATAGC 2286 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 | || ||||| || |||| || | || ||||| || ||||| | ||| || || Sbjct 2287 ATCGAAGAGGTAGTCGCGCTGGTTGGGGTCCTTGATGTACGTGTCGATGAGCAGGGAGTA 2346 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || || |||| |||||||| ||| ||||| ||||||||||| || || || | Sbjct 2347 GGTCTCGGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAACACCTTGCCTCGGC 2406 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 | ||| || || | ||||| | ||| | ||||| || ||||| ||||| || || || Sbjct 2407 GGCCTGGACCTCGTTGGAAAAGCGCTCGAGAAGATTCTCGTTGACAATACCGTCAGAGGC 2466 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATC 93564 || || || || | | ||| || || || ||| | || || | | | | Sbjct 2467 AGCGAAGAAGGCGAGAACATGAGAGATGAAGTGGCGCTCGTTGTCATTCAGGCGGGTGTG 2526 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| | ||||| || ||||| | || || | ||||| || || || || || Sbjct 2527 CCAGTCGTGCAAGTCTTTGGACAGATCCATCTCCTCAGCGGTCCAGAAGGACGCCTCGGC 2586 Query 93625 TTTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 2587 CTTCTTGTACATTTGCCAGAT 2607 >seq117 Length=117856 Score = 152 bits (168), Expect = 6e-32 Identities = 372/561 (66%), Gaps = 11/561 (2%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || || |||||||| |||| |||||||| || |||| | ||| ||| || | | Sbjct 88533 CAAGCGAAGTCGGTGTGTAGGCCTTCGTCGCGGCATATGAGCTCGTTGGAAAACGAAAGC 88474 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || ||||||||||| ||||| || |||| || ||| || || ||||| Sbjct 88473 CCAGGCATGAGCCCTCGTTTCTTCAGCCAGAAGATTGCGGCGAAAGAGCCCGAGAAAAAG 88414 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATAC-GTTCGGCAAAATTTGCGGAATTACTG-- 93268 ||||| ||||| |||| |||||||| | | | | | || || | | | | Sbjct 88413 ATACCCTCCACCGCTGAGAATGCCACCAGCCTGATAGAGAA----TGGCGCGCTCCGGTC 88358 Query 93269 -CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| || |||||| || || ||| ||| || || || | || ||||| || Sbjct 88357 CCCGATCCAACGTAGAGCCCATTCCGCCTTTCTCTGAACGCAGGGAACCGTCTCGATGGC 88298 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 ||| || || | || || |||| | ||| | | | | ||||| || | || || || Sbjct 88297 GTTGAAGAGATGATTTCTCTCGATGGGATCGCCGACGAAGGTATCAATCAGGAGGGAGTA 88238 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || || || | |||||||| ||||||||||| |||||||| || | || || | Sbjct 88237 AGTCTCCGAGTGAATGTTCTCCATGGCAATTTGGAAGCCGTAGAAGCAGCGCGCCTCGGC 88178 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 || ||| ||||| | ||| | ||| ||||| || || || || |||||||| || || Sbjct 88177 GACCTGAACTTCGGCCGCAAAGCGCTCAACGAGGTTCTCGTTCACAATACCATCCGAGGC 88118 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTTATC 93564 || || || || | ||||| || || || ||| || | || | || Sbjct 88117 GGCGAAGAATGCGAGGATATGGGAGATGAAGTGACGCTCGTCCGAGGTGAGTGTATGATT 88058 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||||| || | || |||| ||||||| ||||| | ||||| || || || || Sbjct 88057 CCAATGAGAGATGTCCTTTGCCAGATCGATCTCTTCAGCCGTCCAGAAGCTAGCCTCCGC 87998 Query 93625 TTTTTTGTACATATCCCATAT 93645 ||||||||| |||||||| Sbjct 87997 GCGTTTGTACATTTCCCATAT 87977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556853198850080