Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq220 114 1e-20 seq379 109 5e-19 seq13 105 6e-18 seq339 102 7e-17 >seq220 Length=67240 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || ||| | Sbjct 23561 ATGCAGATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTTGAGTCCAGC 23502 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || ||||||||||||||||| ||||| || Sbjct 23501 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGACCAG 23442 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || ||||| ||| | ||||| ||| || | || ||||||||| Sbjct 23441 CAGCGCCTTATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGTACGCTGTCTGATTACAAC 23382 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 23381 ATCCAGAAGGAGTCCACC 23364 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || || |||| || || ||||| | || Sbjct 22707 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACGCTCGAGGTGGAGTCGTCC 22648 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| || || || || || Sbjct 22647 GACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 22588 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| ||| | |||||| ||||| |||| ||||||||| Sbjct 22587 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGGCGCACGCTCTCGGATTACAAC 22528 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 22527 ATCCAGAAGGA 22517 >seq379 Length=45813 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| || || |||| ||||| || || || || Sbjct 39586 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCC 39527 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| || || ||||| || Sbjct 39526 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 39467 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || ||||| ||| | |||||| |||||| | ||||| || ||| Sbjct 39466 CAGCGCCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTTTCCGACTATAAC 39407 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 39406 ATCCAGAAGGAGTCTACC 39389 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || ||| |||| | || || || || | Sbjct 39026 ATGCAGATCTTTGTAAAGACGCTCACCGGCAAGACGATCACGTTGGAGGTCGAGTCCTCG 38967 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| || || || || || Sbjct 38966 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 38907 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| |||||| |||| || ||||| Sbjct 38906 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACGCTCTCGGACTACAAT 38847 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 38846 ATCCAGAAGGAGTCTAC 38830 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || || |||| || || || || || | Sbjct 38745 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACGCTCGAGGTTGAGTCCTCG 38686 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || || ||||||||||| || || || || || Sbjct 38685 GACACGATTGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 38626 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| ||||| | || || |||||| Sbjct 38625 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGGCGCACTCTTTCTGACTACAAC 38566 Query 22399 ATTCAAAAAGA 22409 ||||| || || Sbjct 38565 ATTCAGAAGGA 38555 >seq13 Length=301256 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| ||| | || || || || ||||||| || || || || || Sbjct 245861 ATGCAGATCTTCGTTAAGACTCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCCTCC 245802 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| ||||| ||||| || Sbjct 245801 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 245742 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | |||||| || || | ||||| |||||| Sbjct 245741 CAGCGCCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGTCGGACGCTGTCCGACTACAAC 245682 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 245681 ATCCAGAAGGAGTCTACC 245664 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| |||| | || || || | | Sbjct 245069 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATCACCTTGGAGGTCGAGTCATCG 245010 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||| ||||||||||| || || ||||| || Sbjct 245009 GACACAATTGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGAATCCCGCCCGACCAG 244950 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| ||||| |||| ||||||||| Sbjct 244949 CAGCGTCTGATCTTCGCGGGGAAGCAGCTTGAGGATGGTCGCACTCTCTCGGATTACAAC 244890 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || ||| | || | || | || ||||| || || Sbjct 244889 ATTCAGAAGGAGTCGACCCTGCACCTTGTCCTCCGCTTGCGTGGTGG 244843 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || | | Sbjct 245580 ATGCAGATATTCGTGAAGACGCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCT 245521 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||||||||| ||||| || || || Sbjct 245520 GACACTATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 245461 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | ||||| ||| ||| | |||||||||||| Sbjct 245460 CAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCCGATTACAAC 245401 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || || || || ||| ||||| Sbjct 245400 ATCCAGAAGGAGTCTACCCTACAT 245377 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || |||| || || || || | | Sbjct 245297 ATGCAGATCTTCGTCAAGACGTTGACTGGCAAGACCATCACGCTCGAGGTCGAGTCTTCT 245238 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || || ||||||||||| || || || || Sbjct 245237 GATACCATCGACAACGTCAAGGCGAAGATCCAGGATAAGGAGGGTATCCCGCCGGACCAG 245178 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| ||| | ||||| || ||| ||||||| |||||| Sbjct 245177 CAGCGCTTGATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGTACCCTCTCCGACTACAAC 245118 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 245117 ATTCAGAAGGAGTCGAC 245101 >seq339 Length=34629 Score = 102 bits (112), Expect = 7e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| ||||| || || || | || || ||||| |||| || || || || || | Sbjct 18643 GATGCAGATTTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTCGAGTCCTC 18702 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | ||| || |||| || || || |||||||||||||| || ||||| || Sbjct 18703 GGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCA 18762 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || || || || || || ||||| ||| | ||||| ||||||| | ||| ||||| Sbjct 18763 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTGAGCGACTACAA 18822 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || || || |||||| Sbjct 18823 CATCCAGAAGGAGTCCACC 18841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419722413944980