Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq86 95.1 2e-14 seq140 91.5 3e-13 seq156 87.8 4e-12 >seq86 Length=145559 Score = 95.1 bits (104), Expect = 2e-14 Identities = 208/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 251844 GTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCC 251903 ||||| ||||||||||||| ||| | ||||||||| | ||||||||||| | || Sbjct 2065 GTGCATACCCTCGTCGCGAGAGATAAGCTCGTTGGAGAAGGTGAGGCCAGGCATTAAACC 2124 Query 251904 ACGGTTCCTGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACAC 251962 ||| ||| | | ||||||||| | ||| || || |||||||| | | ||||||||| | Sbjct 2125 ACGCTTCTTCAACCAGAAGATGGACGC-GAACGAGCCAGAGAAGAAGATACCCTCGAC-C 2182 Query 251963 ACA-CCCATGCAACAAGGCGCTCAGCAAA---CGACTTGTC--CTGCGA-CAAGAACTTC 252015 || | | || ||||||||||| | || ||| | || ||| || | || | Sbjct 2183 GCAGCGAAGGCGACAAGGCGCTCGCCGAATGTCGATTCCTCGTCTGTGATCCAG---CGC 2239 Query 252016 TGTGCCCATGCTGCCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAG 252075 | ||||| | |||||||| | |||||| || ||||| ||||| ||||| || Sbjct 2240 AGGGCCCAGTCCGCCTTCTTCTTGATACAGGGGATGGTCTCGATAGCATCGAAGAGGTAG 2299 Query 252076 TTCCGCTCGGCATCGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGG 252135 | |||| | ||||| |||| || || | || || ||||| |||| || ||| Sbjct 2300 TCGCGCTGGTTGGGGTCCTTGATGTACGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGG 2359 Query 252136 ATG 252138 ||| Sbjct 2360 ATG 2362 >seq140 Length=104841 Score = 91.5 bits (100), Expect = 3e-13 Identities = 326/502 (65%), Gaps = 16/502 (3%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || || |||||||| |||| | ||||||||||| || |||| ||||| ||||| ||| Sbjct 30980 GGCGAAGATCTGTGCAACTGCCAGTTCTCGCTCGCCTACGGTGCCAAGATCCTGCTCAAC 31039 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | | |||| |||||||||| |||| || || ||| || || || || Sbjct 31040 ACCGCGACCCTCCGTCTCAAGCGTGGTCACCGCTACGGCCTCTGTGGCAAGAACGGCACG 31099 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCC-TAACGC 279523 || ||| || || ||||| ||||| | ||||| ||| | || || || || | | | Sbjct 31100 GGCAAGTCGACGCTCATGCGTGCCATCACCAACGGCCAGGTCGAGGGCTTCCCGTCTCCC 31159 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCAC 279583 | ||||| | || | || || ||||||||||||||| || ||| | | Sbjct 31160 GAC-GAGGTCCGCACGTTCTACGTCGAGCACGACATCGACGGTTCGGAGGAGGACACGTC 31218 Query 279584 TGTGTTCGACTTCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCT--GAGGAA 279641 ||| | |||||| | || ||||| | || || | | ||| ||||| Sbjct 31219 TGTCCTTGACTTCATCCTCTCGGACAAGCGCGTCATCG--------TGTCCAAGGAGGAG 31270 Query 279642 ATCATCCAGAAACTGGAGGCCAATGGTTTTGATGAAAGAATGCGT-AATCT-GCCAGTAG 279699 || | ||| || | | | || || | | | || || || | |||| | | Sbjct 31271 ATTGTTGAGACGCTCGCGTCTGTCGGCTTC-ACGGACGACCGCCAGAAGCACGCCATT-G 31328 Query 279700 GTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG 279759 |||| || || |||||||||||||||||||| || ||| ||||||| || || | | Sbjct 31329 GTTCGCTCTCCGGTGGTTGGAAGATGAAGCTTGCGCTCGCTCGCGCTATGCTGTTCAAGG 31388 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 | || |||| |||| |||||||| || ||||| | ||| | |||||| || |||| Sbjct 31389 CTGACATCCTCTTGCTCGATGAGCCGACGAACCATCTCGACGTCGTCAACGTCGCTTGGC 31448 Query 279820 TAGTGTCCTACCTAACCAGTCT 279841 | | | ||||| ||||| || Sbjct 31449 TCGAGGGTTACCTTACCAGCCT 31470 >seq156 Length=98611 Score = 87.8 bits (96), Expect = 4e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 19752 GAAGGCGCCCTCAAGCTCAAGGAGATCAGTTACATCCACGCAGAGGGTATTTCGGCAGGC 19811 || ||||| |||||| ||||||||||||||||||| ||| | |||||||| || ||| Sbjct 84615 GAGGGCGCGCTCAAGATCAAGGAGATCAGTTACATGCACTCGGAGGGTATCCTCGCCGGC 84674 Query 19812 GAACTTAAGCACGGGCCTCTTGCTCTTCTCAACAAG 19847 ||||| |||||||| || || || ||| || || || Sbjct 84675 GAACTCAAGCACGGCCCGCTCGCGCTTATCGACGAG 84710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027822419278372