Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq220 152 1e-31 seq379 149 1e-30 seq13 136 9e-27 seq339 100 7e-16 >seq220 Length=67240 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | ||||| || || ||||| || || || | | Sbjct 22481 CCACCACGCAGACGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAG 22540 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || |||||||||| ||||| || ||| Sbjct 22541 AGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 22600 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | ||| ||| || || Sbjct 22601 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCGGACGACTCCACC 22660 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| ||||| ||||||| ||||||||||| |||||||| Sbjct 22661 TCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 22707 >seq379 Length=45813 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| ||||| || | |||||| || || || || || ||||| | Sbjct 38519 CCACCGCGGAGACGAAGGACGAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 38578 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||||||||| ||||| || ||| Sbjct 38579 AGAGTGCGCCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 38638 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| || ||||| || || | || || || || Sbjct 38639 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCAATCGTGTCCGAGGACTCAACC 38698 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| ||||| ||||||| ||||| ||||| |||||||| Sbjct 38699 TCGAGCGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 38745 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||| | ||| || || |||||||| ||||| | ||||||||| || || || | Sbjct 38819 CGAGATGCAGCGTAGACTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAA 38878 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 || || || ||||||||||| ||||| || | ||||| || || || ||||||| Sbjct 38879 GCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGA 38938 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | ||||| |||||||| || || | || || || || || | |||||||||||| | Sbjct 38939 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGC 38998 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||| || ||||| || || |||||||| Sbjct 38999 CGGTGAGCGTCTTTACAAAGATCTGCAT 39026 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||||| |||||||| || || || | || || || |||||| Sbjct 39396 TCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAG 39455 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||||| || || || |||||||| || || || || || Sbjct 39456 ATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 39515 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || || ||||| ||||| ||||| || ||||||||| Sbjct 39516 TCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 39575 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 39576 AAAATCTGCAT 39586 >seq13 Length=301256 Score = 136 bits (150), Expect = 9e-27 Identities = 170/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | || ||||| |||| ||| || || || || || |||| Sbjct 245067 CATG-CCGCCGCGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGT 245125 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| || || ||||| || | || || || |||||||||| ||||| || Sbjct 245126 CGGAGAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCG 245185 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || ||||||||||| ||||| || ||||| || || | ||| || | Sbjct 245186 GCGGGATACCCTCCTTATCCTGGATCTTCGCCTTGACGTTGTCGATGGTATCAGAAGACT 245245 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||||||||| ||||| || |||| ||||||||||| |||||||| Sbjct 245246 CGACCTCGAGCGTGATGGTCTTGCCAGTCAACGTCTTGACGAAGATCTGCAT 245297 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| || || || ||||| || | || || || |||||| Sbjct 245390 TCCTTCTGGATGTTGTAATCGGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 245449 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || || ||| || || || || |||||||| ||||| ||||| Sbjct 245450 ATGAGGCGCTGCTGG---TCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACA 245506 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| || ||| || || ||||||||||| ||||| ||||| || ||||| Sbjct 245507 TTGTCGATAGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGCGTCTTC 245566 Query 288460 ACGAATATCTGCAT 288473 |||||||||||||| Sbjct 245567 ACGAATATCTGCAT 245580 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || || | ||| ||||| || || || | || || || |||||| Sbjct 244879 TCCTTCTGAATGTTGTAATCCGAGAGAGTGCGACCATCCTCAAGCTGCTTCCCCGCGAAG 244938 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || |||||||| || || ||||| || ||||| |||||||| Sbjct 244939 ATCAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTG 244998 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || | ||||||||||| ||||||| ||||||||| Sbjct 244999 TCAATTGTGTCCGATGACTCGACCTCCAAGGTGATCGTCTTGCCGGTCAAGGTCTTGACG 245058 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 245059 AAGATTTGCAT 245069 >seq339 Length=34629 Score = 100 bits (110), Expect = 7e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 |||| |||| ||| || || ||||| || |||||| || ||||| ||||| || | Sbjct 18851 CGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAA 18792 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 || || || |||||||| || ||||| || ||||| || || || ||||||| Sbjct 18791 GCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGA 18732 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | || || || || || || || | || || || || ||||| ||||| || || | Sbjct 18731 TCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGC 18672 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||||||||| |||||||| Sbjct 18671 CCGTAAGGGTCTTGACGAAAATCTGCAT 18644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179637895160376