Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq86 114 2e-20 seq247 111 2e-19 seq202 89.7 6e-13 >seq86 Length=145559 Score = 114 bits (126), Expect = 2e-20 Identities = 341/513 (66%), Gaps = 15/513 (3%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| | ||||||||| || ||||| || || || |||||| || || ||||| | ||| Sbjct 2065 GTGCATACCCTCGTCGCGAGAGATAAGCTCGTTGGAGAAGGTGAGGCCAGGCATTAAACC 2124 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 ||||||||||||||||| || | || || || ||||||||||| ||||| || Sbjct 2125 ACGCTTCTTCAACCAGAAGATGGACGCGAACGAGCCAGAGAAGAAGATACCCTCGACCGC 2184 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGT-CAAACCACTTCATCG 126236 ||||| || | || ||||| | || | || | | || | | ||| || | Sbjct 2185 AGCGAAGGCGACAAGGCGCTCGCCGAATG-TCGATTCCTCGTCTGTGATCCAGCGCAGGG 2243 Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 126296 |||| | |||||| |||| |||||| |||| ||||| ||| || || ||||| | | Sbjct 2244 CCCAGTCCGCCTTCTTCTTGATACAGGGGATGGTCTCGATAGCATCGAAGAGGTAGT--C 2301 Query 126297 TTTCTGAT--GGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGAC 126354 ||| | || || ||||||||| | || ||||| || || || ||| ||||| Sbjct 2302 GCGCTGGTTGGGGTCCTTGATGTACGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGAT 2361 Query 126355 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 126413 | | ||| || ||| | |||||||| | | || ||| ||| ||||| | Sbjct 2362 GTTCTCCATCAT-AATCTGGAAGCCGTAGAAACACCTTGCCTCGGCGGCCTGGACCTCGT 2420 Query 126414 CGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCC 126472 || |||| | | | | |||||| ||||| || || || |||| || || || Sbjct 2421 TGG-AAAAGCGCTCGAGAAGATTCTCGTTGACAATACCGTCAGAGGCAGCGAAGAAGGCG 2479 Query 126473 AGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT-CAAG 126528 || | || ||||| | | || || || |||| |||| | |||||||| |||| Sbjct 2480 AGAACATGAGAGATGAAGTGGCGCTCGTTGTCATTCAGGCGGGTGTGCCAGTCGTGCAAG 2539 Query 126529 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 || || || ||||| | |||||| || ||||| Sbjct 2540 -TCTTTGGACAGATCCATCTCCTCAGCGGTCCA 2571 >seq247 Length=55536 Score = 111 bits (122), Expect = 2e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 ||||| || ||||| |||||||| ||||| ||| |||||| || | |||||| | ||| Sbjct 43889 CCCTCATCGCGGGATATGAGTTCGTTCGAAAAGGTCAGTCCGGGAAGGAGACCTCTTTTC 43830 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| |||| |||| |||||||||||||| ||||||||||| |||||| Sbjct 43829 TTGAGCCAGAATATCGAGGCGAATGCGCCCGAGAAGAAGATACCCTCCACACAAGCGAAC 43770 Query 126185 GCAA 126188 |||| Sbjct 43769 GCAA 43766 >seq202 Length=72248 Score = 89.7 bits (98), Expect = 6e-13 Identities = 153/218 (70%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 126035 AAGAGTTCCACGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAG 126094 |||||| | ||| | ||||| ||| | || ||||| || | |||||||| || ||| Sbjct 46232 AAGAGTGC-ACG-CGAACTCAGTGTGCATTCCTTCGTCTCGACAAATGAGTTCGTTGGAG 46175 Query 126095 AAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCC 126154 || || || ||||||||||||| || || | |||||| || || || || ||| Sbjct 46174 AAAGTGAGGCCGGGCATGAGACCCCTTTTTTTGAGCCAGAAGATTGCTGCGAACGAGCCC 46115 Query 126155 GAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGAC 126214 ||||| |||||||||||||| || ||||| | ||| || | | || | | || Sbjct 46114 GAGAAAAAGATTCCCTCCACTGCGGCAAACGCTACGAGTCGGTGTG---AGAACGGAGAA 46058 Query 126215 TTTGTGTCA---AACCACTTCATCGCCCACTGCGCCTT 126249 | ||||| | |||||||| |||||||||||||| Sbjct 46057 TGGATGTCACTGATCCACTTCAGAGCCCACTGCGCCTT 46020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597345446123360