Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq209 159 3e-34 >seq209 Length=70723 Score = 159 bits (176), Expect = 3e-34 Identities = 180/240 (75%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 |||||||| |||||||||||| ||| ||||| || | || ||||| || | ||| Sbjct 55597 CCTACATCGCTGGTACCAATGGCTACTCAAACGGTATCATTCCCATGCTTCGCGCGTTCG 55538 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 || | |||| |||||||| ||||||||||| | | | |||| ||||||| ||| Sbjct 55537 ACGCCACGGCCCGCTACGTAGACCAGGGTGGCAACAAGCGCCCGGGTGCTTTCGCCATCT 55478 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | |||||||| |||||||||||||| | ||| ||||||| || ||||||||||||| Sbjct 55477 ACCTCGAGCCTTGGCACGCGGACGTCTTCGAGTTCCTCGACCTTCGCAAGAACCACGGCA 55418 Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCT-TTTTATG 94308 | || || | ||| | ||||| |||||||| |||||||| || ||||| || |||| Sbjct 55417 AGGAGGAGGTCCGCGCCCGTGACCTTTTCTACGCCCTCTGGGTTCCCGACCTCTTGTATG 55358 Score = 127 bits (140), Expect = 2e-24 Identities = 301/447 (67%), Gaps = 11/447 (2%) Strand=Plus/Minus Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785 || ||| ||||| |||| |||||| |||| |||||||||||||||||| || ||| Sbjct 54855 TTCAACTTGAACCGGGTCATCGACGCCAACTACTACCCCGTCCCGGAGGCTAAGCGCTCG 54796 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| || | || |||||||| |||| ||||||||| |||| |||||| | |||| Sbjct 54795 AACATGCGCAACCGCCCCATCGGTCTCGGTGTCCAGGGTCTCGCAGACGCGTTCATGATT 54736 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCG-GCGGGTTTGAATTTGAACATATTCGAAAG 94904 | || || |||| |||||| | || ||| || | | || | | || ||||| | Sbjct 54735 CTCCGCCTTCCCTTCGACTCGGAGGAGGCGCGCAAG-CTCAACGTTCAGATCTTCGAGAC 54677 Query 94905 CATTTATTACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC 94963 ||| || ||| ||| | || | | | | | |||| | | || ||| || Sbjct 54676 CATCTACCACGCCGCCGTCGAGGCCA-GCATGGAAATGGCAATTACCGAAGGC---CCTT 54621 Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 | || | | | || |||||| ||||| || ||||||||||||||||||| Sbjct 54620 ATGAGACCTACGAGGGCTCGCCCGCTAGCCAGGGTCAGTTCCAGTTCGACCTCTGGGGTG 54561 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGG--GAAGCTCTACGCGCTGATGTTATCAAACACGG 95081 ||| ||| |||| || | |||||| | |||| | | | | ||| ||| ||||| Sbjct 54560 TGACGCCTTCGGAGCTCTGGGACTGGGCGTCGCTCAAGGAG--AAGGTTGCCAAGCACGG 54503 Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141 | | ||| ||||||| || || || |||||||| || || || ||||| || || Sbjct 54502 TCTCCGCAACTCGCTGCTCGTCGCGCCAATGCCCACCGCGTCTACTAGCCAGATTCTCGG 54443 Query 95142 CAACAACGAGTCGTTCGAACCCTTCAC 95168 | |||||||| ||||| |||| ||| Sbjct 54442 CTTCAACGAGTGCTTCGAGCCCTACAC 54416 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/133 (74%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 95287 CGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTA 95345 ||||| ||||||||| |||||| || || | || || || |||||||| |||| Sbjct 54245 CGCGCACAACGGCTCGGTCCAGTCGATTCCCGAGATCCCTCGCGATGTCAAGGCGATCTA 54186 Query 95346 CAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCC 95405 ||||||||| ||||||||| ||||| | | ||||| | ||| || | |||||| | Sbjct 54185 CAAGACCGTATGGGAGATCTCGCAGAAGAAGGTCCTCGATCTCGCAGCGGACCGCGGCGC 54126 Query 95406 CTTCATCTGCCAG 95418 |||||||||||| Sbjct 54125 GTTCATCTGCCAG 54113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494716447028320