Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq13 104 2e-17 seq339 102 8e-17 seq379 89.7 5e-13 seq220 87.8 2e-12 >seq13 Length=301256 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || ||||| || || || || | | Sbjct 245668 GACTCCTTCTGGATGTTGTAGTCGGACAGCGTCCGACCATCCTCAAGCTGCTTCCCAGCA 245727 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| ||||| || || || ||||| ||| || || | Sbjct 245728 AAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 245787 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||| ||||||| || | || || ||||| ||||| || Sbjct 245788 TTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGAGTCTTA 245847 Query 138601 ACAAAAATCTGCATGGC 138617 || || ||||||||||| Sbjct 245848 ACGAAGATCTGCATGGC 245864 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| ||| | || | || | | |||||||| ||||||||||||||| Sbjct 245070 GCCGCCGCGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGA 245129 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| |||||| || || || |||| |||| | ||||| |||||||| || Sbjct 245130 GAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGG 245189 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || || || ||| || || | | || | ||| || | ||||| || Sbjct 245190 GATACCCTCCTTATCCTGGATCTTCGCCTTGACGTTGTCGATGGTATCAGAAGACTCGAC 245249 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| ||| | || || ||||||| || || || || |||||||| Sbjct 245250 CTCGAGCGTGATGGTCTTGCCAGTCAACGTCTTGACGAAGATCTGCAT 245297 >seq339 Length=34629 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||| || || || || | Sbjct 18837 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCG 18778 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| ||||| || || ||||| || ||||| ||| || || | | Sbjct 18777 AAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACA 18718 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||||| ||||||| || | ||||| || || || || || Sbjct 18717 TTG-TCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTT 18659 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 18658 GACGAAAATCTGCAT 18644 >seq379 Length=45813 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| |||||||||||||| | ||| ||| |||||| || || || |||| | Sbjct 38554 CTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCCTCAAGCTGCTTGCCGGCGAA 38613 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 38614 GATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTT 38673 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||| | ||||| ||||||| ||| | || || || |||| || || || Sbjct 38674 GTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCGGTCAAGGTCTTCAC 38733 Query 138603 AAAAATCTGCAT 138614 || |||||||| Sbjct 38734 GAAGATCTGCAT 38745 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/197 (70%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||| |||||| | || || |||||||| || || || | Sbjct 39393 GACTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCG 39452 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| ||||| ||||| || || || ||||| ||| || || | | Sbjct 39453 AAGATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 39512 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | ||||||| ||||| ||||| | || | || || || || || || || Sbjct 39513 TTGT-CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 39571 Query 138600 TACAAAAATCTGCATGG 138616 || ||||||||||||| Sbjct 39572 GACGAAAATCTGCATGG 39588 >seq220 Length=67240 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||| || | || ||| |||||||| || || |||| | Sbjct 22516 CTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAA 22575 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| | ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 22576 GATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 22635 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| |||||||||||||| ||| | || || || |||| || || || Sbjct 22636 GTCGATCGTGTCGGACGACTCCACCTCGAGCGTGATGGTCTTGCCGGTCAACGTCTTGAC 22695 Query 138603 AAAAATCTGCATG 138615 || ||||||||| Sbjct 22696 GAAGATCTGCATG 22708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496255626018240