Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq379 96.9 3e-15 seq13 89.7 5e-13 seq86 82.4 7e-11 >seq379 Length=45813 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAAT 45194 ||||||||||| || ||||| |||||||| || || || || ||| || | Sbjct 38821 AGATGCAGCGTAGACTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGC 38880 Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | |||| || |||||||| ||||| ||||| || || || || || Sbjct 38881 TGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATC 38940 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || || | || | || | |||||| || |||||||| || | || | ||| ||||| Sbjct 38941 TTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCC 38999 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || |||||||| || ||||| Sbjct 39000 GGTGAGCGTCTTTACAAAGATCTGCAT 39026 >seq13 Length=301256 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || || || ||||| || ||||| || || || || ||| Sbjct 245068 ATGCCGCCGCGCAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCG 245127 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| | || || | || || || ||| | ||||| || |||||||||||| Sbjct 245128 GAGAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGC 245187 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || || || ||||| || || || |||| || | || | ||| || |||||||| Sbjct 245188 GGGATACCCTCCTTATCCTGGATCTTCGCCTTGA-CGTTGTCGATGGTATCAGAAGACTC 245246 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || | || ||||| || | || || || || || ||||| Sbjct 245247 GACCTCGAGCGTGATGGTCTTGCCAGTCAACGTCTTGACGAAGATCTGCAT 245297 >seq86 Length=145559 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 138378 AAGCACGCAAAGTTGGTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTGCTAAACGTC 138437 || || || |||| ||| || | |||||||||||||| || ||||| || || || Sbjct 4143 AAACAGGCGAAGTCGGTATGCATGCCTTCGTCGCGAGAAATGAGTTCATTTGAGAAAGTA 4084 Query 138438 AGCCCCGGCATGACGCCTTTGGTCTTGATGTAAAAGATGGCCGCGAAACTGCCCGaaaaa 138497 || || ||||| | ||| |||||| ||||||||| |||||| ||| || || Sbjct 4083 AGGCCGGGCATCAAGCCGCGTTTCTTGAGCCAAAAGATGGACGCGAACGAGCCGGAGAAG 4024 Query 138498 aaaaCGCCTTCGACAATAGCGAAAGCCACCATGCG 138532 || | |||||||||| ||| ||||| || | ||| Sbjct 4023 AAGATGCCTTCGACAGCAGCAAAAGCGACTAGGCG 3989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451997030156320