Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq86 120 4e-22 seq247 111 2e-19 seq97 95.1 1e-14 >seq86 Length=145559 Score = 120 bits (132), Expect = 4e-22 Identities = 340/512 (66%), Gaps = 13/512 (3%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| | ||||||||| || ||||| || || || |||||| || || ||||| | ||| Sbjct 2065 GTGCATACCCTCGTCGCGAGAGATAAGCTCGTTGGAGAAGGTGAGGCCAGGCATTAAACC 2124 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 ||||||||||||||||| || | || ||||||||||||||||| ||||| || Sbjct 2125 ACGCTTCTTCAACCAGAAGATGGACGCGAACGAGCCAGAGAAGAAGATACCCTCGACCGC 2184 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTAT-CAAACCACTTCATCG 127709 ||||| || | || |||||| | || | || | | || | | ||| || | Sbjct 2185 AGCGAAGGCGACAAGGCGCTCGCCGAATG-TCGATTCCTCGTCTGTGATCCAGCGCAGGG 2243 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 127769 |||| | ||||| |||| |||||| |||| ||||| ||| || || ||||| | | Sbjct 2244 CCCAGTCCGCCTTCTTCTTGATACAGGGGATGGTCTCGATAGCATCGAAGAGGTAGT--C 2301 Query 127770 TTTCTGAT--GGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGAC 127827 ||| | || || ||||||||| | || ||||| || || || ||| ||||| Sbjct 2302 GCGCTGGTTGGGGTCCTTGATGTACGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGAT 2361 Query 127828 CAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 127886 | | ||| || ||| | |||||||| | | || ||| ||| ||||| | Sbjct 2362 GTTCTCCATCAT-AATCTGGAAGCCGTAGAAACACCTTGCCTCGGCGGCCTGGACCTCGT 2420 Query 127887 CGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCC 127945 || |||| | | | | |||||| ||||| || || || |||| || || || Sbjct 2421 TGG-AAAAGCGCTCGAGAAGATTCTCGTTGACAATACCGTCAGAGGCAGCGAAGAAGGCG 2479 Query 127946 AGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGA 128002 || | || ||||| | | || || || |||| |||| | |||||||| | Sbjct 2480 AGAACATGAGAGATGAAGTGGCGCTCGTTGTCATTCAGGCGGGTGTGCCAGTCGTGCAAG 2539 Query 128003 TCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 || || || ||||| | |||||| || ||||| Sbjct 2540 TCTTTGGACAGATCCATCTCCTCAGCGGTCCA 2571 >seq247 Length=55536 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 ||||| || ||||| |||||||| ||||| ||| ||| || || | |||||| | ||| Sbjct 43889 CCCTCATCGCGGGATATGAGTTCGTTCGAAAAGGTCAGTCCGGGAAGGAGACCTCTTTTC 43830 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | |||||| |||| |||| ||| ||||||||||| ||||||||||| |||||| Sbjct 43829 TTGAGCCAGAATATCGAGGCGAATGCGCCCGAGAAGAAGATACCCTCCACACAAGCGAAC 43770 Query 127658 GCAAATAGACGCTCGGCAAAG 127678 |||| || || ||||||| Sbjct 43769 GCAACAAGTCGAATGGCAAAG 43749 >seq97 Length=131314 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 ||| ||||| |||||| |||||||| || ||||| || || ||| | ||||| Sbjct 124541 AGCGAACTCGGTGTGGAGGCCCTCGTCTCGAGAGATCCTCTCGTTGGAGTACGTGAGACC 124600 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| |||||| |||||||| | ||| || || | || || ||||||||||| || Sbjct 124601 TGGCAGGAGACCACGCTTCTTGAGCCAAAATATTGACGCGAACGATCCAGAGAAGAAAAT 124660 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680 || ||| |||| ||||| || | ||| | | ||||||||| Sbjct 124661 TCCTTCCGCACAAGCGAAAGCGACTAGTCTCATGGCAAAGGA 124702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613498825626720