Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Peniophora_20sp._20CONT_20[genbank_20GCA_5F001632445.1_202016-04-28] 1,092 sequences; 46,030,792 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq220 181 1e-40 seq379 161 1e-34 seq13 138 1e-27 seq339 131 2e-25 >seq220 Length=67240 Score = 181 bits (200), Expect = 1e-40 Identities = 172/217 (79%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| || |||| || |||||||| ||||| ||||| || || || |||||| | Sbjct 22492 ACGAAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGCCC 22551 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||||||||| ||||||||||||||||| | ||| | || |||||| Sbjct 22552 ATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 22611 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||||| ||| | ||| | | | ||||||| ||| ||||| || | ||||| Sbjct 22612 GTCCTGGATCTTCGCCTTCA-CGTTGTCGATCGTGTCGGACGACTCCACCTCGAGCGTGA 22670 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| |||| ||| || || ||||| ||||| Sbjct 22671 TGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 22707 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || || || || |||| |||||||||||||| ||||| Sbjct 23370 CTCCTTCTGGATGTTGTAATCAGACAGCGTACGGCCGTCCTCGAGCTGCTTGCCCGCGAA 23429 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||||| || | | |||||||||| |||||| ||||| | Sbjct 23430 GATAAGGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 23489 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||||| || || || || | |||||||| ||||| || || || || || Sbjct 23490 GTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTCAC 23549 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 23550 GAAGATCTGCAT 23561 Score = 96.9 bits (106), Expect = 4e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 22744 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 22803 Query 46462 TATCAAGCGCTGCTGGTC 46479 |||| |||||||||||| Sbjct 22804 GATCAGGCGCTGCTGGTC 22821 >seq379 Length=45813 Score = 161 bits (178), Expect = 1e-34 Identities = 156/198 (79%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| || || |||||||| || ||||||||| |||| || |||||||||||| Sbjct 38549 GTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGCCCGTCCTCAAGCTGCTTGCCG 38608 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| |||| |||||||||||| | ||| | || |||||||||| ||||||| |||| Sbjct 38609 GCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 38668 Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575 | ||| | | | |||||| || || || || | ||||||||| ||||| |||| || Sbjct 38669 A-CGTTGTCAATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTCTTGCCGGTCAAGGT 38727 Query 46576 TTTAACAAAGATTTGCAT 46593 || || ||||| ||||| Sbjct 38728 CTTCACGAAGATCTGCAT 38745 Score = 159 bits (176), Expect = 4e-34 Identities = 161/207 (78%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 ||||||| ||| |||||| |||||||||||||| || || ||||| | || || ||| Sbjct 38821 AGATGCAGCGTAGACTCCTTCTGGATATTGTAGTCCGAGAGCGTGCGGCCATCCTCAAGC 38880 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507 |||||||||||||| |||| |||||||||||| | ||| | || |||||||||| |||| Sbjct 38881 TGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATC 38940 Query 46508 TTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCC 46566 ||| ||| | ||| | | | ||||| || || || |||| |||||| || ||||| Sbjct 38941 TTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCGACCTCCAACGTGATCGTCTTGCC 38999 Query 46567 CGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || |||||||| ||||| Sbjct 39000 GGTGAGCGTCTTTACAAAGATCTGCAT 39026 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || |||||||| || ||||| | || |||||||||||||| ||||| Sbjct 39395 CTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 39454 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||||| || | || |||||||||| |||||| ||||| | Sbjct 39455 GATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 39514 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||||| || || || || | |||||||| ||||| || || || || || Sbjct 39515 GTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 39574 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 39575 GAAAATCTGCAT 39586 >seq13 Length=301256 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| || || || |||| || ||||||||||||||||| Sbjct 245106 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAA 245165 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||| | ||| | | |||||| ||| ||||||| ||||| ||| Sbjct 245166 GATCAAGCGCTGCTGGTCCGGCGGGATACCCTCCTTATCCTGGATCTTCGCCTTGA-CGT 245224 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || || || || || || | ||||||||| ||||| |||| ||| || | Sbjct 245225 TGTCGATGGTATCAGAAGACTCGACCTCGAGCGTGATGGTCTTGCCAGTCAACGTCTTGA 245284 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 245285 CGAAGATCTGCAT 245297 Score = 134 bits (148), Expect = 2e-26 Identities = 163/221 (74%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 46373 CTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTG 46432 ||| |||| | || ||||| | ||| |||||| ||||| ||||| ||||| || || Sbjct 245362 CTTGAACGTACCA--AGATGTAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGGGTA 245419 Query 46433 CGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTC 46492 || |||| |||||||||||||| ||||| || | |||||||||||| | || | || | Sbjct 245420 CGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCC 245479 Query 46493 TCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACC 46552 ||||||||| ||||||| ||| | | | | ||||| ||| || || || | | Sbjct 245480 TCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATAGTGTCAGACGACTCGACCTCGAGC 245539 Query 46553 GTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||| ||||| || ||||| || || || || ||||| Sbjct 245540 GTGATGGTCTTGCCGGTGAGCGTCTTCACGAATATCTGCAT 245580 Score = 127 bits (140), Expect = 2e-24 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 46377 AACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCT 46436 |||||| || || || | ||| |||||| ||||| ||||||||||| || || || Sbjct 245647 AACGCACCA--AGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTCCGAC 245704 Query 46437 CGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCT 46496 | || || |||||||| || || || || | |||||||||||||| || | || ||||| Sbjct 245705 CATCCTCAAGCTGCTTCCCAGCAAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCT 245764 Query 46497 TGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTG 46555 ||||| |||||| ||||| ||| | | | |||||| || || || || | ||| Sbjct 245765 TGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTG 245823 Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| ||||| || || || ||||| ||||| ||||| Sbjct 245824 ATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCAT 245861 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| || || |||||||| | || || |||||||| || ||||| Sbjct 244878 CTCCTTCTGAATGTTGTAATCCGAGAGAGTGCGACCATCCTCAAGCTGCTTCCCCGCGAA 244937 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||||| ||| | | |||||||||| |||||| ||| | ||| Sbjct 244938 GATCAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCCTGAATCTTCGCCTTCA-CGT 244996 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || |||| ||||| || ||||| |||| || || | Sbjct 244997 TGTCAATTGTGTCCGATGACTCGACCTCCAAGGTGATCGTCTTGCCGGTCAAGGTCTTGA 245056 Query 46581 CAAAGATTTGCAT 46593 | ||||||||||| Sbjct 245057 CGAAGATTTGCAT 245069 >seq339 Length=34629 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| || ||||| |||| || ||||||||||| ||||| Sbjct 18835 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 18776 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||||| ||| | | |||||||||| |||||| ||||| | Sbjct 18775 GATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 18716 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || || | ||||||||||||||||| || || || || Sbjct 18715 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGAC 18656 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 18655 GAAAATCTGCAT 18644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565230684495840